STRINGSTRING
API60831.1 API60831.1 API58260.1 API58260.1 API58701.1 API58701.1 API58711.1 API58711.1 API61074.1 API61074.1 API59688.1 API59688.1 API59718.1 API59718.1 API59741.1 API59741.1 API59828.1 API59828.1 API60778.1 API60778.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
API60831.15-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
API58260.15-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
API58701.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
API58711.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
API61074.12-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
API59688.12-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
API59718.1Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
API59741.1Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
API59828.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
API60778.15-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
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