STRINGSTRING
Cj0239c Cj0239c mrp mrp iscS iscS Cj1639 Cj1639
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Cj0239cNifU protein homolog; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. (323 aa)
mrpPutative ATP/GTP-binding protein (Mrp protein homolog); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (368 aa)
iscSOriginal (2000) note: Cj0240c, probable aminotransferase (nifS protein homolog), len: 393 aa; similar to many e.g. NIFS_KLEPN nifS protein (397 aa),fasta scores; opt: 1067 z-score: 1533.6 E(): 0, 47.0% identity in 383 aa overlap. 62.8% identity to HP0220. Contains PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature, PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site, and Pfam match to entry PF00266 aminotran_5, Aminotransferases class-V,score 358.80, E-value 5.9e-104; Updated (2006) note: Characterised within Escherichia coli with acceptable identity scor [...] (393 aa)
Cj1639NifU protein homolog; Original (2000) note: Cj1639, unknown, len: 90 aa; similar to members of the NIFU family of hypothetical poteins e.g. NIU1_RHOCA NIFU protein 1 (135 aa), fasta scores; opt: 158 z-score: 219.3 E(): 6.8e-05 36.5% identity in 63 aa overlap. Identical to TR:O69292 (EMBL:Y16882) C. jejuni NIFU-like protein. 52.2% identity to HP1492. Contains Pfam match to entry PF01106 NifU-like,NifU-like domain. Also similar to N-terminus of Cj0239c (38.2% identity in 76 aa overlap). Functional classification - Conserved hypothetical proteins. (90 aa)
Your Current Organism:
Campylobacter jejuni NCTC 11168
NCBI taxonomy Id: 192222
Other names: C. jejuni subsp. jejuni NCTC 11168 = ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819 = NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
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