STRINGSTRING
ceuC ceuC ceuD ceuD ceuE ceuE nuoD nuoD Cj1721c Cj1721c mreB mreB clpX clpX Cj0178 Cj0178 Cj0177 Cj0177 cdtA cdtA cdtB cdtB cdtC cdtC Cj0045c Cj0045c Cj0122 Cj0122 flaD flaD flgR flgR gyrA gyrA Cj1055c Cj1055c wlaN wlaN groEL groEL cbpA cbpA racR racR racS racS Cj1279c Cj1279c pseB pseB Cj1306c Cj1306c Cj1322 Cj1322 flaB flaB flaA flaA maf7 maf7 pldA pldA ceuB ceuB Cj0486 Cj0486 sdhA sdhA pgm pgm Cj0427 Cj0427 Cj0385c Cj0385c msrP msrP cmeR cmeR modA modA oorB oorB Cj0571 Cj0571 Cj0618 Cj0618 flgG flgG flaC flaC cfrA cfrA aspB aspB Cj0859c Cj0859c fliE fliE
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
ceuCEnterochelin uptake permease; Original (2000) note: Cj1353, ceuC, probable enterochelin uptake permease, len: 312 aa; highly similar to TR:Q46004 (EMBL:X88849) Campylobacter coli ceuC (312 aa), fasta scores; opt: 1784 z-score: 2112.8 E(): 0, 88.8% identity in 312 aa overlap, and similar to e.g. FATC_VIBAN ferric anguibactin transport system permease protein FATC (317 aa), fasta scores; opt: 593 z-score: 708.6 E(): 3.6e-32, 31.7% identity in 306 aa overlap. No Hp ortholog. Also similar to e.g. Cj1352 (27.2% identity in 316 aa overlap), and Cj1615 (27.5% identity in 298 aa overlap). Cont [...] (312 aa)
ceuDOriginal (2000) note: Cj1354, ceuD, probable enterochelin uptake ATP-binding protein, len: 251 aa; highly similar to TR:Q46005 (EMBL:X88849) Campylobacter coli ceuD (251 aa), fasta scores; opt: 1258 z-score: 1347.9 E(): 0, 82.5% identity in 246 aa overlap, and similar to e.g. FHUC_BACSU ferrichrome transport ATP-binding protein (269 aa), fasta scores; opt: 613 z-score: 663.4 E(): 1.2e-29, 38.0% identity in 245 aa overlap. No Hp ortholog. Contains PS00017 ATP/GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature, and Pfam match to entry PF00005 ABC_tran, ABC trans [...] (251 aa)
ceuEOriginal (2000) note: Cj1355, ceuE, probable enterochelin uptake periplasmic binding protein, len: 330 aa; highly similar to TR:Q46006 (EMBL:X88849) Campylobacter coli ceuE (328 aa), fasta scores; opt: 1903 z-score: 2111.3 E(): 0, 90.6% identity in 330 aa overlap,and similar to e.g. FATB_VIBAN ferric anguibactin-binding protein precursor (322 aa), fasta scores; opt: 540 z-score: 605.4 E(): 2e-26, 30.1% identity in 279 aa overlap. No Hp match. Contains probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site; Updated [...] (330 aa)
nuoDNADH dehydrogenase I chain D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (408 aa)
Cj1721cOriginal (2000) note: Cj1721c, possible outer membrane protein, len: 214 aa; very weak similarity to several e.g. TR:P95343 (EMBL:U52069) Neisseria gonorrhoeae outer membrane protein precursor (174 aa), blastp scores; E= 0.0043, 29% identity in 176 aa overlap. Contains probable N-terminal signal sequence. 22.3% identity to HP0706 (outer membrane protein (omp15)). Functional classification - Membranes, lipoproteins and porins. (214 aa)
mreBOriginal (2000) note: Cj0276, mreB, homolog of E. coli rod shape-determining protein, len: 346 aa; highly similar to many e.g. MREB_ECOLI rod shape-determining protein mreB (347 aa), fasta scores; opt: 1199 z-score: 1757.3 E(): 0, 55.8% identity in 339 aa overlap. 71.4% identity to HP1373. Contains PS00017 ATP/GTP-binding site motif A (P-loop); Updated (2006) note: Pfam domain PF06723 MreB/Mbl protein was identified within CDS. MreB is known to be a rod shape-determining protein in bacteria and makes up the bacterial cytoskeleton. Further support given to product function. Characterise [...] (346 aa)
clpXATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (417 aa)
Cj0178Original (2000) note: Cj0178, possible outer membrane siderophore receptor, len: 755 aa; similar to e.g. YC17_HAEIN probable tonB-dependent receptor HI1217 (913 aa), fasta scores; opt: 440 z-score: 1818.4 E(): 0,32.7% identity in 912 aa overlap, and TR:O68881 (EMBL:AF055999) outer membrane hemin receptor PhuR from Pseudomonas aeruginosa (764 aa), fasta scores; opt: 145 z-score: 207.4 E(): 0.00027 22.3% identity in 806 aa overlap. No Hp match. Contains N-terminal signal sequence; Updated (2006) note: Pfam domains PF07715 TonB-dependent Receptor Plug Domain and PF00593 TonB dependent rec [...] (755 aa)
Cj0177Putative iron transport protein; Original (2000) note: Cj0177, probable lipoprotein,len: 283 aa; simlar to TR:O68876 (EMBL:AF055999) hypothetical protein PhuW from Pseudomonas aeruginosa hemin uptake locus (295 aa), fasta scores; opt: 375 z-score: 307.6 E(): 7.1e-10, 31.3% identity in 246 aa overlap. No Hp match. Contains N-terminal signal sequence with appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site; Updated (2006) note: Pfam domain PF04187 Protein of unknown function, DUF399 identified within CDS. Literature search identified papers giving furt [...] (283 aa)
cdtACytolethal distending toxin A; CDTs are cytotoxins which induce cell distension, growth arrest in G2/M phase, nucleus swelling, and chromatin fragmentation in HeLa cells. (268 aa)
cdtBOriginal (2000) note: Cj0078c, cdtB, cytolethal distending toxin, len: 265 aa; identical toTR:Q46101 (EMBL:U51121) cdtB (265 aa) and similar to e.g. TR:Q47089 (EMBL:U03293) Escherichia coli cdtB (273 aa), fasta scores; opt: 946 z-score: 1533.6 E(): 0, 55.2% identity in 268 aa overlap. No Hp match. Contains N-terminal signal sequence; Updated (2006) note: Prosite domain PRO1388 CDTOXINB, Cytolethal distending toxin B signature identified within CDS. Product modified to more specific family member due to motif match. Characterised within Campylobacter jejuni, so putative not added to pro [...] (265 aa)
cdtCOriginal (2000) note: Cj0077c, cdtC, cytolethal distending toxin, len: 189 aa, identical to TR:Q46102 (EMBL:U51121) cdtC (189 aa). No Hp match. Contains N-terminal signal sequence; Updated (2006) note: Pfam domain PF03499 Cytolethal distending toxin C identified within CDS. Product modified to more specific family member due to motif match. Characterised within Campylobacter jejuni, so putative not added to product function. Functional classification -Pathogenicity; PMID:10688204, PMID:8675309, PMID:11083762. (189 aa)
Cj0045cPutative iron-binding protein; Original (2000) note: Cj0045c, possible iron-binding protein, len: 240 aa; weak similarity to members of the eukaryotic iron-binding hemerythrin family,e.g. HEMT_LINUN hemerythrin alpha chain (117 aa), fasta scores; opt: 105 z-score: 137.1 E(): 2.5, 23.8% identity in 122 aa overlap. Note that all of the iron-binding residues are conserved. No Hp match, similar to Cj0072c (pseudogene), Cj0241c (30.9% identity in 123 aa overlap) and Cj1224 (27.7% identity in 202 aa overlap). Contains a C(9-11) polymorphic region at the N-terminus; C11 would allow the transl [...] (240 aa)
Cj0122Hypothetical protein Cj0122; Original (2000) note: Cj0122, unknown, len: 229 aa; no Hp match. Similar in C-terminus to Cj0055c (46.6% identity in 148 aa overlap), and in N-terminus to Cj0416 (88.2% identity in 34 aa overlap); Updated (2006) note: Similar to hypothetical proteins from other bacteria. Functional classification -Unknown. (229 aa)
flaDPutative flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (750 aa)
flgRSigma-54 associated transcriptional activator; Original (2000) note: Cj1024c, probable signal-transduction regulatory protein, len: 433 aa; similar to e.g. NTRC_PROVU nitrogen regulation protein NR(I) (473 aa), fasta scores; opt: 957 z-score: 1002.5 E(): 0, 38.8% identity in 397 aa overlap, and ATOC_ECOLI acetoacetate metabolism regulatory protein (461 aa), fasta scores; opt: 929 z-score: 973.5 E(): 0, 38.2% identity in 453 aa overlap. 57.1% identity to HP0703. Contains Pfam match to entry PF00072 response_reg, Response regulator receiver domain, PS00675 and PS00676 Sigma-54 interactio [...] (433 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (863 aa)
Cj1055cPutative sulfatase family protein; Original (2000) note: Cj1055c, probable integral membrane protein, len: 657 aa; weakly similar to hypothetical proteins, e.g. YQGS_BACSU (638 aa), fasta scores; opt: 197 z-score: 215.2 E(): 0.00011, 22.1% identity in 602 aa overlap. 24.3% identity to HP0578. Contains PS00044 Bacterial regulatory proteins, lysR family signature, though this may be spurious; Updated (2006) note: Pfam domain PF00884 Sulfatase identified within CDS. Sulfatases are enzymes that hydrolyze various sulphate esters. Five probable transmembrane helices predicted by TMHMM2.0. Pr [...] (657 aa)
wlaNBeta-1,3 galactosyltransferase; Original (2000) note: Cj1139c, probable galactosyltransferase, len: 303 aa; similar to e.g. TR:O07340 (EMBL:X85787) Streptococcus pneumoniae SS-1,4-galactosyltransferase CPS14J (318 aa), fasta scores; opt: 309 z-score: 362.2 E(): 7.1e-13, 26.1% identity in 249 aa overlap. No Hp match. Contains Pfam match to entry PF00535 Glycos_transf_2, Glycosyl transferases. Contains C(8-9) polymorphic region at aa 111. C(8), the consensus, allows translation of the full length protein. C(9) would cause a premature truncation after a further 20 aa; Updated (2006) note: [...] (303 aa)
groEL60 kD chaperonin (cpn60); Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (545 aa)
cbpAOriginal (2000) note: Cj1229, cbpA, probable curved-DNA binding protein, len: 297 aa; similar to e.g. CBPA_ECOLI curved DNA-binding protein (306 aa), fatsa scores; opt: 514 z-score: 550.9 E(): 2.2e-23, 32.8% identity in 287 aa overlap. 52.0% identity to HP1024. Contains S00636 Nt-dnaJ domain signature, and Pfam match to entry PF00226 DnaJ, DnaJ domain; Updated (2006) note: Pfam domain PF01556 DnaJ C terminal region identified within CDS. Further support given to product function. Characterised in Escherichia coli with marginal identity score. Putative kept within product function. Func [...] (297 aa)
racRTwo-component regulator; Original (2000) note: Cj1261, racR, two-component regulator, len: 223 aa; identical to TR:O68795 (EMBL:AF053960) C. jejuni response regulator protein (223 aa), and similar to e.g. BAER_ECOLI transcriptional regulatory protein BAER (240 aa), fasta scores; opt: 485 z-score: 583.5 E(): 3.3e-25, 37.4% identity in 219 aa overlap. 52.0% identity to HP0166. Also simlar to Cj1227c (50.7% identity in 223 aa overlap). Contains Pfam match to entry PF00072 response_reg, Response regulator receiver domain, and Pfam match to entry PF00486 trans_reg_C,Transcriptional regulato [...] (223 aa)
racSOriginal (2000) note: Cj1262, racS, probable two-component sensor (histidine kinase), len: 411 aa; 99.5% identical to TR:O68796 (EMBL:AF053961) C. jejuni putative histidine protein kinase (fragment) (189 aa), and similar to e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fast scores; opt: 188 z-score: 217.1 E(): 8.5e-05, 24.4% identity in 242 aa overlap. N-term has 28.2% identity to HP0165, C-term has 37.9% identity to HP0164. Also similar to Cj1226c (31.3% identity in 412 aa overlap). Contains Pfam match to entry PF00512 signal,Signal carboxyl-terminal domain, and Pfam match [...] (411 aa)
Cj1279cOriginal (2000) note: Cj1279c, probable fibronectin domain-containing lipoprotein, len: 411 aa; 31.1% identity to HP0746. Contains probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Also contains 4x Pfam match to entry PF00041 fn3, Fibronectin type III domain; Updated (2006) note: Specific characterisation with acceptable identity score has not been carried out yet, so putative kept within product function. Functional classification - Pathogenicity. (411 aa)
pseBUDP-GlcNAc-specific C4,6 dehydratase/C5 epimerase; Catalyzes the first step in the biosynthesis of pseudaminic acid, a sialic-acid-like sugar that is used to modify flagellin. Has both C6 dehydratase and C5 epimerase activities that result in the production of both UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-4- hexulose and UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose. Belongs to the polysaccharide synthase family. (334 aa)
Cj1306cHypothetical protein Cj1306c (617 family); Original (2000) note: Cj1306c, unknown, len: 405 aa; no Hp match. A member of the 617 family of C.j. proteins containing homopolymeric tracts; similar to Cj1310c (59.8% identity in 410 aa overlap), Cj1305c (78.1% identity in 407 aa overlap), Cj1342c (38.5% identity in 426 aa overlap) and Cj0617/Cj0618 (39.2% identity in 181 aa overlap/39.5% identity in 220 aa overlap). Contains a variable polyG-tract at aa 194; G(9) (consensus) gives this ORF, G(8) would cause truncation after 5 aa; Updated (2006) note: Similar to hypothetical proteins from ot [...] (408 aa)
Cj1322Hypothetical protein Cj1322; Original (2000) note: Cj1322, unknown, len: 106 aa; no Hp match; Updated (2006) note: Identifed as part of Campylobacter jejuni O-linked glycosylation locus (Cj1293 - Cj1342). Literature search identified paper linking Cj1321-Cj1326 as being a glycosylation islet (PMID:16230626). Functional classification - Unknown; PMID:16230626, PMID:12586395, PMID:16573682,PMID:12781527. (106 aa)
flaBFlagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (572 aa)
flaAFlagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA binds to flagellar assembly factor FliW protein, preventing FliW from binding to CsrA, so that CsrA can then bind flaA mRNA and represses its translation. (572 aa)
maf7Motility accessory factor (function unknown); Original (2000) note: Cj1342c, unknown, len: 413 aa; no Hp match. A member of the 617 family of C.j. proteins containing homopolymeric tracts; similar to Cj1310c (37.3% identity in 424 aa overlap), Cj1305c (38.5% identity in 423 aa overlap), Cj0617/Cj0618 (49.7% identity in 191 aa overlap/43.4% identity in 221 aa overlap),Cj1306c (38.3% identity in 426 aa overlap). Contains C(9-10) polymorphic region at aa 188. C(9) consensus gives this ORF, C(10) gives truncation after a further 19 aa; Updated (2006) note: Some characterisation work carrie [...] (413 aa)
pldAPhospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (329 aa)
ceuBEnterochelin uptake permease; Original (2000) note: Cj1352, ceuB, probable enterochelin uptake permease, len: 322 aa; highly similar to TR:Q46003 (EMBL:X88849) Campylobacter coli ceuB (322 aa), fasta scores; opt: 1839 z-score: 2038.7 E(): 0, 89.1% identity in 322 aa overlap, and similar to e.g. FATD_VIBAN ferric anguibactin transport system permease protein FATD (314 aa), fasta scores; opt: 921 z-score: 1026.8 E(): 0,43.3% identity in 305 aa overlap. Also similar to Cj1615 (31.0% identity in 326 aa overlap), and Cj1353 (27.2% identity in 316 aa overlap). Contains Pfam match to entry PF [...] (322 aa)
Cj0486Putative sugar transporter; Original (2000) note: Cj0486, probable sugar transporter, len: 418 aa; simlar to members of the FHS family e.g. FUCP_ECOLI L-fucose permease (438 aa), fasta scores; opt: 848 z-score: 1022.1 E(): 0, 37.2% identity in 390 aa overlap, and GLUP_BRUAB glucose/galactose transporter (412 aa), fasta scores; opt: 456 z-score: 830.5 E(): 0, 33.4% identity in 410 aa overlap. 32.6% identity to HP1174; Updated (2006) note: Pfam domain PF07690 Major Facilitator Superfamily identified within CDS. Prosite PS50850 MFS, Major facilitator superfamily also identified along with [...] (418 aa)
sdhAOriginal (2000) note: Cj0437, sdhA, probable succinate dehydrogenase flavoprotein subunit, len: 611 aa; similar to many e.g. DHSA_ECOLI succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) (588 aa), fasta scores; opt: 1036 z-score: 1136.5 E(): 0, 37.3% identity in 569 aa overlap and to e.g. FRDA_WOLSU fumarate reductase flavoprotein subunit (656 aa), fasta scores; opt: 862 z-score: 1211.2 E(): 0, 33.3% identity in 595 aa overlap. No Hp ortholog, but 32.3% identity to HP0192 fumarate reductase, flavoprotein subunit (frdA), and 33.8% identity to C. jejuni frdA (Cj0409). Contains Pf [...] (611 aa)
pgm2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (492 aa)
Cj0427Hypothetical protein Cj0427; Original (2000) note: Cj0427, unknown, len: 111 aa; no Hp match. Functional classification - Unknown. (111 aa)
Cj0385cOriginal (2000) note: Cj0385c, probable integral membrane protein, len: 310 aa; similar to many hypothetical integral membrane proteins e.g. TR:O29973 (EMBL:AE001087) Archaeoglobus fulgidus AF0266 (276 aa),fasta scores; opt: 155 z-score: 221.8 E(): 4.5e-05, 26.9% identity in 279 aa overlap. 30.8% identity to HP1234. Contains Pfam match to entry PF00892 DUF6, Integral membrane protein, score 29.90, E-value 5.9e-05; Updated (2006) note: Pfam domain PF00892 Integral membrane protein DUF6 identified within CDS. Ten probable transmembrace helices identified by TMHMM2.0 within CDS. Further s [...] (310 aa)
msrPPutative molybdenum containing oxidoreductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to [...] (297 aa)
cmeRTranscriptional regulator CmeR; Original (2000) note: Cj0368c, probable transcriptional regulatory protein, len: 210 aa; similar to members of the tetR family e.g. TR:G3327947 (EMBL:AF053772) Staphylococcus aureus transcriptional regulator qacR (regulator of multidrug efflux protein QacB) (188 aa), fasta scores; opt: 162 z-score: 285.0 E(): 1.3e-08, 29.3% identity in 198 aa overlap, and MTRR_NEIGO regulatory protein MTRR (210 aa), fasta scores; opt: 137 z-score: 210.6 E(): 0.00018, 31.3% identity in 83 aa overlap. No Hp match. Contains Pfam match to entry PF00440 tetR, Bacterial regula [...] (210 aa)
modAOriginal (2000) note: Cj0303c, modA, probable molybdate-binding lipoprotein, len: 249 aa; similar to e.g. MODA_RHOCA molybdate-binding periplasmic protein precursor (252 aa), fasta scores; opt: 354 z-score: 449.0 E(): 9.4e-18, 30.8% identity in 224 aa overlap, and MODA_ECOLI (257 aa), fasta scores; opt: 220 z-score: 245.4 E(): 2.1e-06, 25.0% identity in 232 aa overlap. 42.3% identity to HP0473. Contains probable N-terminal signal sequence with appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site; Updated (2006) note: Pfam domain PF01547 Bacterial extr [...] (249 aa)
oorBOriginal (2000) note: Cj0537, oorB, probable OORB subunit of 2-oxoglutarate:acceptor oxidoreductase, len: 281 aa; similar to TR:O68229 (EMBL:AF021094) H. pylori OORB subunit of 2-oxoglutarate:acceptor oxidoreductase (274 aa), fasta scores; opt: 1356 z-score: 2118.6 E(): 0,69.7% identity in 274 aa overlap. 72.9% identity to HP0590; Updated (2006) note: Pfam domain PF02775 Thiamine pyrophosphate enzyme, C-terminal identified within CDS. Further support given to product function. Characterised within Helicobacter pylori with acceptable identity score. Putative not added to product functio [...] (281 aa)
Cj0571Original (2000) note: Cj0571, possible transcriptional regulator; len: 290 aa; similar in C-terminus to two hypothetical deoR family transcriptional regulators from E. coli; YFJR_ECOLI (233 aa), fasta scores; opt: 279 z-score: 374.9 E(): 1.4e-13, 27.7% identity in 202 aa overlap, and YAFY_ECOLI (285 aa), fasta scores; opt: 167 z-score: 203.3 E(): 0.0005, 40.4% identity in 57 aa overlap. No Hp match, Contains probable helix-turn-helix motif at aa 25-46 (Score 1541, +4.44 SD); Updated (2006) note: No specific characterisation with acceptable identity scores carried out yet. Putative kept [...] (290 aa)
Cj0618Hypothetical protein Cj0618 (617 family); Original (2000) note: Cj0618, unknown, len: 215 aa; no Hp match. A member of the 617 family of C.j. proteins containing homopolymeric tracts; similar to C-terminus of Cj1305c (36.7% identity in 221 aa overlap), Cj1306c (39.1% identity in 220 aa overlap), Cj1310c (33.6% identity in 220 aa overlap) and Cj1342c (43.4% identity in 221 aa overlap). The similarities continue from the upstream ORF Cj0617, suggesting that these two ORFs may encode a single protein, but are frameshifted w.r.t. each other. There is a poly-G tract at thesite of the possib [...] (215 aa)
flgGFlagellar basal-body rod protein; Original (2000) note: Cj0698, flgG, probable flagellar basal-body rod protein, len: 263 aa; highly similar to e.g. FLGG_ECOLI flagellar basal-body rod protein FLGG (260 aa), fasta scores; opt: 825 z-score: 886.8 E(): 0, 46.4% identity in 261 aa overlap. 62.0% identity to HP1585; also similar to upstream gene Cj0697 (flgG2, 29.4% identity in 279 aa overlap). Contains PS00588 Flagella basal body rod proteins signature and Pfam match to entry PF00460 flg_bb_rod, Flagella basal body rod proteins; Updated (2006) note: Characterised within Escherichia coli w [...] (263 aa)
flaCFlagellin; Plays a role in virulence. (249 aa)
cfrAFerric enterobactin uptake receptor; Original (2000) note: Cj0755, cfrA, probable iron uptake protein (ferric receptor), len: 696 aa; almost identical to TR:O07651 (EMBL:U80812) C. coli ferric receptor CFRA (696 aa); 98.7% identity in 696 aa overlap. Also simimlar to e.g. TR:O87518 (EMBL:AF081285) E. coli exogenous ferric siderophore receptor R4 (669 aa), fasta scores; opt: 1127 z-score: 1247.0 E(): 0, 34.5% identity in 693 aa overlap. 23.4% identity to HP0686; Updated (2006) note: Pfam domains PF07715 TonB-dependent Receptor Plug Domain and PF00593 TonB dependent receptor identified w [...] (696 aa)
aspBAspartate aminotransferase; Original (2000) note: Cj0762c, aspB, probable aspartate aminotransferase, len: 389 aa; similar to e.g. AAT1_BACSU aspartate aminotransferase (EC 2.6.1.1) (393 aa), fasta scores; opt: 1216 z-score: 1352.8 E(): 0, 50.6% identity in 393 aa overlap. 57.5% identity to HP0672. Contains Pfam match to entry PF00155 aminotran_1,Aminotransferases class-I; Updated (2006) note: Characterised in Bacillus subtilis with acceptable identity score. Putative not added to product function. Functional classification -Amino acid biosynthesis - Aspartate family; PMID:10712618. (389 aa)
Cj0859cHypothetical protein Cj0859c; Original (2000) note: Cj0859c, unknown, len: 142 aa; no Hp match. Gln-rich in C-term; Updated (2006) note: Similar to hypothetical proteins from other bacteria. Functional classification -Unknown. (142 aa)
fliEOriginal (2000) note: Cj0526c, fliE, probable flagellar hook-basal body complex protein, len: 98 aa; similar to e.g. FLIE_BACSU flagellar hook-basal body complex protein (106 aa), fasta scores; opt: 182 z-score: 262.0 E(): 2.7e-07 34.0% identity in 97 aa overlap. 60.9% identity to HP1557; Updated (2006) note: Pfam domain PF02049 Flagellar hook-basal body complex protein FliE identified within CDS. These genes form proteins that are thought be involved in bacterial flagellar assembly. FliE is said to form part of the hook-basal body complex of bacterial flagellar. The FlgB, FlgC and Flg [...] (98 aa)
Your Current Organism:
Campylobacter jejuni NCTC 11168
NCBI taxonomy Id: 192222
Other names: C. jejuni subsp. jejuni NCTC 11168 = ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819 = NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
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