STRINGSTRING
cas9 cas9 Cj0511 Cj0511 Cj1365c Cj1365c htrA htrA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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Your Input:
cas9Putative CRISPR-associated protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this prot [...] (984 aa)
Cj0511Putative secreted protease; Original (2000) note: Cj0511, probable secreted protease, len: 444 aa; similar to many e.g. PRC_ECOLI tail-specific protease precursor (682 aa), fasta scores; opt: 357 z-score: 500.2 E(): 1.4e-20, 29.9% identity in 388 aa overlap. 54.3% identity to HP1350. Contains possible N-terminal signal sequence and Pfam match to entry PF00595 PDZ, PDZ domain (Also known as DHR or GLGF)., score 52.00, E-value 1.3e-11; Updated (2006) note: Pfam domain PF03572 Peptidase family S41 identified within CDS. Further support given to product function. Characterised within Esche [...] (444 aa)
Cj1365cOriginal (2000) note: Cj1365c, probable secreted serine protease, len: 1041 aa; similar to e.g. TR:Q54484 (EMBL:D78380) Serratia marcescens serine protease homologue SSP-H2 (1034 aa), fasta scores; opt: 245 z-score: 257.1 E(): 5.1e-07, 23.5% identity in 591 aa overlap, and PRTS_SERMA extracellular serine protease precursor (EC 3.4.21.-) (1045 aa), fasta scores; opt: 205 z-score: 214.6 E(): 0.00012, 23.7% identity in 615 aa overlap. No Hp match. Contains PS00137 Serine proteases,subtilase family, histidine active site, PS00138 Serine proteases, subtilase family, serine active site, Pfam [...] (1041 aa)
htrASerine protease (protease DO); Original (2000) note: Cj1228c, htrA, probable serine protease (protease DO), len: 472 aa; 99.2% identical to TR:Q46120 (EMBL:X82628) C. jejuni serine protease htrA (472 aa), and similar to e.g. HTRA_ECOLI protease DO precursor (EC 3.4.21.-) (474 aa), fasta scores; opt: 965 z-score: 1004.5 E(): 0, 39.5% identity in 461 aa overlap. 50.5% identity to HP1019. Contains Pfam match to entry PF00089 trypsin, and 2x Pfam match to entry PF00595 PDZ, PDZ domain; Updated (2006) note: Characterised in Escherichia coli and Campylobacter jejuni, so putative not added to [...] (472 aa)
Your Current Organism:
Campylobacter jejuni NCTC 11168
NCBI taxonomy Id: 192222
Other names: C. jejuni subsp. jejuni NCTC 11168 = ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819 = NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
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