(40 nodes) Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transport system, ATPase component, HisP-type network (Mycobacterium sp. MS1601)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQA02269.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	AQA06225.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AQA02424.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	AQA02425.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AQA06226.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	AQA02600.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (271 aa)
	AQA02601.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	AQA06261.1	Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	AQA06271.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	AQA02662.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AQA02663.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	AQA02665.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AQA06287.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	AQA02754.1	Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AQA02755.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	AQA02756.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	AQA02806.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
	glnQ	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AQA03070.1	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
	AQA03071.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	AQA03072.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)
	AQA06331.1	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AQA06395.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	AQA03846.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	AQA03847.1	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	AQA06466.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AQA03848.1	Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	AQA04667.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	AQA04668.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	AQA06607.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	glnQ-2	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AQA05008.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (319 aa)
	AQA05009.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AQA05010.1	Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	AQA05078.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	BVC93_24735	ABC transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	AQA05857.1	Glutamate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
	AQA05858.1	Glutamate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AQA05859.1	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	AQA05860.1	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)

Your Current Organism:

Mycobacterium sp. MS1601

NCBI taxonomy Id: 1936029
Other names: M. sp. MS1601

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQA02269.1	AQA02424.1	BVC93_07300	BVC93_08225	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.652
AQA02269.1	AQA02425.1	BVC93_07300	BVC93_08230	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.707
AQA02269.1	AQA02601.1	BVC93_07300	BVC93_09330	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
AQA02269.1	AQA02662.1	BVC93_07300	BVC93_09700	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AQA02269.1	AQA02663.1	BVC93_07300	BVC93_09705	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
AQA02269.1	AQA02754.1	BVC93_07300	BVC93_10260	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.665
AQA02269.1	AQA02755.1	BVC93_07300	BVC93_10265	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.566
AQA02269.1	AQA02806.1	BVC93_07300	BVC93_10595	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
AQA02269.1	AQA03071.1	BVC93_07300	BVC93_12215	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.660
AQA02269.1	AQA03846.1	BVC93_07300	BVC93_17010	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
AQA02269.1	AQA03847.1	BVC93_07300	BVC93_17015	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
AQA02269.1	AQA03848.1	BVC93_07300	BVC93_17025	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
AQA02269.1	AQA04667.1	BVC93_07300	BVC93_22115	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
AQA02269.1	AQA04668.1	BVC93_07300	BVC93_22120	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
AQA02269.1	AQA05009.1	BVC93_07300	BVC93_24305	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
AQA02269.1	AQA05010.1	BVC93_07300	BVC93_24310	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.652
AQA02269.1	AQA05857.1	BVC93_07300	BVC93_29755	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
AQA02269.1	AQA05858.1	BVC93_07300	BVC93_29760	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AQA02269.1	AQA05859.1	BVC93_07300	BVC93_29765	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
AQA02269.1	AQA05860.1	BVC93_07300	BVC93_29770	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.521