STRINGSTRING
APY07151.1 APY07151.1 APY07155.1 APY07155.1 APY07208.1 APY07208.1 APY07241.1 APY07241.1 APY07359.1 APY07359.1 dapA dapA dapF dapF APY07693.1 APY07693.1 APY07837.1 APY07837.1 APY07905.1 APY07905.1 APY08189.1 APY08189.1 APY08261.1 APY08261.1 APY08293.1 APY08293.1 APY08320.1 APY08320.1 asd asd APY08617.1 APY08617.1 APY08840.1 APY08840.1 APY08841.1 APY08841.1 APY08842.1 APY08842.1 asnB asnB lysA lysA APY09190.1 APY09190.1 APY09200.1 APY09200.1 APY09246.1 APY09246.1 APY09476.1 APY09476.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APY07151.1Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
APY07155.1Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology. (634 aa)
APY07208.1Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
APY07241.1Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
APY07359.1L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (474 aa)
dapA4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (294 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (259 aa)
APY07693.1Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
APY07837.1Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
APY07905.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
APY08189.1L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
APY08261.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (416 aa)
APY08293.1Beta-aspartyl-peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
APY08320.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (442 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (329 aa)
APY08617.1Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
APY08840.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
APY08841.1Homoserine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AB hydrolase superfamily. MetX family. (338 aa)
APY08842.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
asnBFunctions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (401 aa)
APY09190.12,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family. (271 aa)
APY09200.1Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (391 aa)
APY09246.14-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (233 aa)
APY09476.1Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
Your Current Organism:
Winogradskyella sp. J142
NCBI taxonomy Id: 1936080
Other names: W. sp. J14-2, Winogradskyella sp. J14-2
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