(5 nodes) Ami_3, and NlpC/P60 family network (Seonamhaeicola sp. S23)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APY10393.1	Peptidoglycan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	APY10467.1	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	APY12792.1	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	APY12019.1	Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	APY12592.1	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)

Your Current Organism:

Seonamhaeicola sp. S23

NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APY10393.1	APY12019.1	BWZ22_03675	BWZ22_12610	Peptidoglycan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
APY10393.1	APY12792.1	BWZ22_03675	BWZ22_07510	Peptidoglycan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
APY10467.1	APY12592.1	BWZ22_04075	BWZ22_15795	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
APY10467.1	APY12792.1	BWZ22_04075	BWZ22_07510	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
APY12019.1	APY10393.1	BWZ22_12610	BWZ22_03675	Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
APY12592.1	APY10467.1	BWZ22_15795	BWZ22_04075	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
APY12592.1	APY12792.1	BWZ22_15795	BWZ22_07510	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
APY12792.1	APY10393.1	BWZ22_07510	BWZ22_03675	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
APY12792.1	APY10467.1	BWZ22_07510	BWZ22_04075	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
APY12792.1	APY12592.1	BWZ22_07510	BWZ22_15795	LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601