7 items (Seonamhaeicola sp. S23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APY12587.1	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	serC	Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (354 aa)
	APY11460.1	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	APY11461.1	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. (296 aa)
	glyA	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (424 aa)
	APY12402.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
	APY12443.1	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)

Your Current Organism:

Seonamhaeicola sp. S23

NCBI taxonomy Id: 1936081
Other names: S. sp. S2-3, Seonamhaeicola sp. S2-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APY11460.1	APY11461.1	BWZ22_09455	BWZ22_09460	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.999
APY11460.1	APY12402.1	BWZ22_09455	BWZ22_14735	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
APY11460.1	APY12443.1	BWZ22_09455	BWZ22_14975	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APY11460.1	APY12587.1	BWZ22_09455	BWZ22_15770	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
APY11460.1	glyA	BWZ22_09455	BWZ22_13675	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	0.822
APY11461.1	APY11460.1	BWZ22_09460	BWZ22_09455	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APY11461.1	APY12402.1	BWZ22_09460	BWZ22_14735	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APY11461.1	APY12587.1	BWZ22_09460	BWZ22_15770	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
APY12402.1	APY11460.1	BWZ22_14735	BWZ22_09455	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
APY12402.1	APY11461.1	BWZ22_14735	BWZ22_09460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.995
APY12402.1	APY12443.1	BWZ22_14735	BWZ22_14975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
APY12402.1	APY12587.1	BWZ22_14735	BWZ22_15770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
APY12402.1	glyA	BWZ22_14735	BWZ22_13675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	0.822
APY12443.1	APY11460.1	BWZ22_14975	BWZ22_09455	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APY12443.1	APY12402.1	BWZ22_14975	BWZ22_14735	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
APY12443.1	APY12587.1	BWZ22_14975	BWZ22_15770	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
APY12443.1	glyA	BWZ22_14975	BWZ22_13675	Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	0.919
APY12587.1	APY11460.1	BWZ22_15770	BWZ22_09455	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
APY12587.1	APY11461.1	BWZ22_15770	BWZ22_09460	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.406
APY12587.1	APY12402.1	BWZ22_15770	BWZ22_14735	Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941