STRINGSTRING
AQR65110.1 AQR65110.1 AQR63720.1 AQR63720.1 AQR63888.1 AQR63888.1 AQR63889.1 AQR63889.1 AQR63900.1 AQR63900.1 AQR63901.1 AQR63901.1 AQR63905.1 AQR63905.1 AQR66629.1 AQR66629.1 AQR66641.1 AQR66641.1 AQR64000.1 AQR64000.1 AQR64007.1 AQR64007.1 rppH rppH AQR64161.1 AQR64161.1 AQR64265.1 AQR64265.1 AQR64443.1 AQR64443.1 AQR64452.1 AQR64452.1 rnhA rnhA AQR64480.1 AQR64480.1 pnp pnp AQR64599.1 AQR64599.1 AQR64641.1 AQR64641.1 rnhB rnhB AQR64724.1 AQR64724.1 AQR66721.1 AQR66721.1 AQR64729.1 AQR64729.1 dut dut AQR64861.1 AQR64861.1 AQR64932.1 AQR64932.1 xseB xseB AQR65176.1 AQR65176.1 AQR65208.1 AQR65208.1 AQR65231.1 AQR65231.1 rph rph AQR65272.1 AQR65272.1 xseA xseA rne rne AQR65568.1 AQR65568.1 AQR65622.1 AQR65622.1 BXU06_11660 BXU06_11660 surE surE AQR65791.1 AQR65791.1 AQR65824.1 AQR65824.1 AQR66827.1 AQR66827.1 AQR65832.1 AQR65832.1 AQR65835.1 AQR65835.1 AQR66833.1 AQR66833.1 AQR65915.1 AQR65915.1 AQR65962.1 AQR65962.1 AQR65973.1 AQR65973.1 AQR66087.1 AQR66087.1 AQR66882.1 AQR66882.1 AQR66270.1 AQR66270.1 AQR66888.1 AQR66888.1 AQR66418.1 AQR66418.1 mhpB-2 mhpB-2 AQR66421.1 AQR66421.1 AQR66900.1 AQR66900.1 AQR66422.1 AQR66422.1 AQR66424.1 AQR66424.1 AQR66425.1 AQR66425.1 AQR66426.1 AQR66426.1 AQR66429.1 AQR66429.1 AQR66430.1 AQR66430.1 AQR66533.1 AQR66533.1 AQR66536.1 AQR66536.1 AQR66537.1 AQR66537.1 AQR66538.1 AQR66538.1 AQR66540.1 AQR66540.1 AQR66570.1 AQR66570.1 AQR66572.1 AQR66572.1 AQR66573.1 AQR66573.1 mhpC mhpC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AQR65110.1Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
AQR63720.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
AQR63888.1Phenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AQR63889.1phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (441 aa)
AQR63900.15-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
AQR63901.12-oxo-hepta-3-ene-1,7-dioic acid hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
AQR63905.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
AQR66629.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
AQR66641.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
AQR64000.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
AQR64007.1Isomerase/hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
rppHRNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. (174 aa)
AQR64161.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
AQR64265.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
AQR64443.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (447 aa)
AQR64452.1Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
rnhARibonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. (149 aa)
AQR64480.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (589 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (716 aa)
AQR64599.1Nitrite reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (822 aa)
AQR64641.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (199 aa)
AQR64724.1Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
AQR66721.1Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
AQR64729.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (150 aa)
AQR64861.1ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AQR64932.1Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (79 aa)
AQR65176.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
AQR65208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
AQR65231.1Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (199 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (239 aa)
AQR65272.1YicC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (449 aa)
rneHypothetical protein; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1196 aa)
AQR65568.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
AQR65622.1Alkene reductase; FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
BXU06_11660Putative addiction module antidote protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
surE5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (247 aa)
AQR65791.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
AQR65824.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
AQR66827.1Phenylacetic acid degradation operon negative regulatory protein PaaX; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
AQR65832.1Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
AQR65835.1Ureidoglycolate hydrolase; Catalyzes the formation of glyoxylate from (S)-ureidoglycolate; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AQR66833.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AQR65915.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
AQR65962.1Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
AQR65973.1Xanthine dehydrogenase accessory protein XdhC; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
AQR66087.1Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. (341 aa)
AQR66882.1Nucleotide pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
AQR66270.1Toxin of toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
AQR66888.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
AQR66418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
mhpB-23-(2,3-dihydroxyphenyl)propionate dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family. (314 aa)
AQR66421.1Bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
AQR66900.13-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
AQR66422.13-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
AQR66424.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
AQR66425.12-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
AQR66426.1Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (316 aa)
AQR66429.1NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AQR66430.1Purine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
AQR66533.1Catechol 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
AQR66536.12-hydroxy-6-oxo-2,4-heptadienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AQR66537.12-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AQR66538.1Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (316 aa)
AQR66540.12-oxo-3-hexenedioate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
AQR66570.1Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
AQR66572.12-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
AQR66573.1Acetaldehyde dehydrogenase (acetylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
mhpCHemerythrin; Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid. (287 aa)
Your Current Organism:
Aquaspirillum sp. LM1
NCBI taxonomy Id: 1938604
Other names: A. sp. LM1
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