8 items (Sphingomonas sp. LM7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tpiA	Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (248 aa)
	AQR73003.1	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. (661 aa)
	AQR73004.1	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
	pgk	Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family. (395 aa)
	AQR73007.1	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	gpmA	Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (228 aa)
	AQR74333.1	Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	tal	Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (218 aa)

Your Current Organism:

Sphingomonas sp. LM7

NCBI taxonomy Id: 1938607
Other names: S. sp. LM7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR73003.1	AQR73004.1	BXU08_04345	BXU08_04350	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.995
AQR73003.1	AQR73007.1	BXU08_04345	BXU08_04365	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AQR73003.1	AQR74333.1	BXU08_04345	BXU08_12340	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AQR73003.1	gpmA	BXU08_04345	BXU08_10680	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.853
AQR73003.1	pgk	BXU08_04345	BXU08_04355	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.	0.934
AQR73003.1	tal	BXU08_04345	BXU08_17855	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.	0.999
AQR73003.1	tpiA	BXU08_04345	BXU08_02980	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.	0.941
AQR73004.1	AQR73003.1	BXU08_04350	BXU08_04345	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	0.995
AQR73004.1	AQR73007.1	BXU08_04350	BXU08_04365	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AQR73004.1	AQR74333.1	BXU08_04350	BXU08_12340	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.401
AQR73004.1	gpmA	BXU08_04350	BXU08_10680	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.781
AQR73004.1	pgk	BXU08_04350	BXU08_04355	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.	0.999
AQR73004.1	tal	BXU08_04350	BXU08_17855	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.	0.953
AQR73004.1	tpiA	BXU08_04350	BXU08_02980	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.	0.999
AQR73007.1	AQR73003.1	BXU08_04365	BXU08_04345	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	0.979
AQR73007.1	AQR73004.1	BXU08_04365	BXU08_04350	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.994
AQR73007.1	AQR74333.1	BXU08_04365	BXU08_12340	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AQR73007.1	gpmA	BXU08_04365	BXU08_10680	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.863
AQR73007.1	pgk	BXU08_04365	BXU08_04355	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.	0.772
AQR73007.1	tal	BXU08_04365	BXU08_17855	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.	0.961