18 items (Sphingomonas sp. LM7) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQR72350.1	2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AQR72828.1	Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology. (801 aa)
	AQR73003.1	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. (661 aa)
	AQR73007.1	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	zwf	Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (486 aa)
	pgl	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (235 aa)
	edd	Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (606 aa)
	AQR73282.1	2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	AQR73312.1	Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
	AQR73372.1	Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
	AQR73673.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. (317 aa)
	AQR75832.1	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AQR74333.1	Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	prs	Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (311 aa)
	AQR74703.1	Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. (219 aa)
	AQR74756.1	Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
	pgi	Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family. (497 aa)
	tal	Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (218 aa)

Your Current Organism:

Sphingomonas sp. LM7

NCBI taxonomy Id: 1938607
Other names: S. sp. LM7

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR72350.1	AQR73282.1	BXU08_00525	BXU08_06155	2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AQR72350.1	AQR73372.1	BXU08_00525	BXU08_06675	2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
AQR72350.1	AQR74703.1	BXU08_00525	BXU08_14530	2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.	0.879
AQR72350.1	edd	BXU08_00525	BXU08_06145	2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.	0.907
AQR72350.1	pgi	BXU08_00525	BXU08_17090	2-keto-3-deoxygluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.	0.569
AQR72828.1	AQR73007.1	BXU08_03280	BXU08_04365	Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AQR72828.1	AQR75832.1	BXU08_03280	BXU08_10835	Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AQR72828.1	pgi	BXU08_03280	BXU08_17090	Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.	0.835
AQR73003.1	AQR73007.1	BXU08_04345	BXU08_04365	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AQR73003.1	AQR73673.1	BXU08_04345	BXU08_08510	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.	0.920
AQR73003.1	AQR74333.1	BXU08_04345	BXU08_12340	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Fructose-bisphosphatase, class II; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AQR73003.1	AQR74703.1	BXU08_04345	BXU08_14530	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.	0.998
AQR73003.1	AQR74756.1	BXU08_04345	BXU08_14825	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
AQR73003.1	edd	BXU08_04345	BXU08_06145	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.	0.424
AQR73003.1	pgi	BXU08_04345	BXU08_17090	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.	0.994
AQR73003.1	pgl	BXU08_04345	BXU08_06140	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.	0.462
AQR73003.1	prs	BXU08_04345	BXU08_14045	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.	0.963
AQR73003.1	tal	BXU08_04345	BXU08_17855	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.	0.999
AQR73003.1	zwf	BXU08_04345	BXU08_06135	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.	Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.	0.847
AQR73007.1	AQR72828.1	BXU08_04365	BXU08_03280	Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815