STRINGSTRING
SMC30539.1 SMC30539.1 SMC30731.1 SMC30731.1 SMC30788.1 SMC30788.1 gltX gltX SMC31537.1 SMC31537.1 SMC32088.1 SMC32088.1 SMC37070.1 SMC37070.1 SMC41642.1 SMC41642.1 SMC37879.1 SMC37879.1 map map SMC49541.1 SMC49541.1 gltX-2 gltX-2 SMC56754.1 SMC56754.1 SMC57576.1 SMC57576.1 SMC57604.1 SMC57604.1 SMC57772.1 SMC57772.1 tig tig SMC58778.1 SMC58778.1 SMC55625.1 SMC55625.1 acsF acsF SMC64521.1 SMC64521.1 SMC67446.1 SMC67446.1 SMC63095.1 SMC63095.1 ctaB ctaB SMC63311.1 SMC63311.1 SMC63745.1 SMC63745.1 SMC63762.1 SMC63762.1 SMC63879.1 SMC63879.1 SMC63935.1 SMC63935.1 SMC63960.1 SMC63960.1 SMC63969.1 SMC63969.1 SMC64094.1 SMC64094.1 SMC64125.1 SMC64125.1 SMC64267.1 SMC64267.1 bchN bchN bchB bchB SMC64335.1 SMC64335.1 bchL bchL SMC64385.1 SMC64385.1 hemH hemH SMC75232.1 SMC75232.1 SMC72050.1 SMC72050.1 SMC80493.1 SMC80493.1 hemE hemE SMC81864.1 SMC81864.1 ctaA ctaA SMC83882.1 SMC83882.1 SMC83301.1 SMC83301.1 SMC86670.1 SMC86670.1 SMC86785.1 SMC86785.1 SMC97444.1 SMC97444.1 SMC97454.1 SMC97454.1 SMC98440.1 SMC98440.1 SMC98581.1 SMC98581.1 SMC99421.1 SMC99421.1 cobQ cobQ cobD cobD SMC99489.1 SMC99489.1 cobS cobS SMC99509.1 SMC99509.1 cobT cobT SMC99542.1 SMC99542.1 SMC99549.1 SMC99549.1 cbiA cbiA SMC99567.1 SMC99567.1 SMC99578.1 SMC99578.1 SMC99587.1 SMC99587.1 SMC99595.1 SMC99595.1 SMC99604.1 SMC99604.1 SMC99612.1 SMC99612.1 SMC99624.1 SMC99624.1 SMC99630.1 SMC99630.1 SMC99638.1 SMC99638.1 SMD01051.1 SMD01051.1 SMD01354.1 SMD01354.1 SMD02719.1 SMD02719.1 SMD04090.1 SMD04090.1 SMD04405.1 SMD04405.1 SMD06167.1 SMD06167.1 SMD06239.1 SMD06239.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMC30539.1MoxR-like ATPase. (281 aa)
SMC30731.1Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (385 aa)
SMC30788.1General stress protein 26. (160 aa)
gltXglutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (487 aa)
SMC31537.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (225 aa)
SMC32088.15-aminolevulinate synthase. (406 aa)
SMC37070.1Uncharacterized conserved protein GlcG, DUF336 family. (142 aa)
SMC41642.1Heme oxygenase. (188 aa)
SMC37879.1Starvation-inducible DNA-binding protein; Belongs to the Dps family. (160 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (279 aa)
SMC49541.1Divinylchlorophyllide 8-vinylreductase. (353 aa)
gltX-2glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (442 aa)
SMC56754.1Starvation-inducible DNA-binding protein; Belongs to the Dps family. (151 aa)
SMC57576.1ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (186 aa)
SMC57604.1glutamyl-Q tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (281 aa)
SMC57772.1NADH dehydrogenase. (321 aa)
tigTrigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (520 aa)
SMC58778.1Uncharacterized protein. (484 aa)
SMC55625.1Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (159 aa)
acsFMg-protoporphyrin IX monomethyl ester (oxidative) cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. (362 aa)
SMC64521.15-aminolevulinate synthase. (406 aa)
SMC67446.1Hypothetical protein. (324 aa)
SMC63095.1Coproporphyrinogen oxidase. (287 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (308 aa)
SMC63311.1Hypothetical protein. (289 aa)
SMC63745.1Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (333 aa)
SMC63762.1Protoporphyrin IX magnesium-chelatase. (565 aa)
SMC63879.13-hydroxyethyl bacteriochlorophyllide a dehydrogenase. (321 aa)
SMC63935.1Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. (329 aa)
SMC63960.1Chlorophyllide a reductase subunit Y. (511 aa)
SMC63969.1Chlorophyllide a reductase subunit Z. (481 aa)
SMC64094.1Geranylgeranyl reductase. (398 aa)
SMC64125.1Chlorophyll synthase. (300 aa)
SMC64267.13-vinyl bacteriochlorophyllide hydratase. (170 aa)
bchNFerredoxin protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (431 aa)
bchBFerredoxin protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (522 aa)
SMC64335.1Cobaltochelatase CobN subunit. (1206 aa)
bchLFerredoxin protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (298 aa)
SMC64385.1Mg-protoporphyrin IX methyltransferase. (235 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (337 aa)
SMC75232.1MoxR-like ATPase. (325 aa)
SMC72050.1Heme-degrading monooxygenase HmoA. (102 aa)
SMC80493.1Porphobilinogen synthase; Belongs to the ALAD family. (330 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (342 aa)
SMC81864.1Putative membrane protein. (147 aa)
ctaACytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (354 aa)
SMC83882.1uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. (257 aa)
SMC83301.1Cobaltochelatase CobS subunit. (326 aa)
SMC86670.1Haem-degrading. (662 aa)
SMC86785.1Cobaltochelatase CobT subunit. (604 aa)
SMC97444.1Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (271 aa)
SMC97454.1uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (229 aa)
SMC98440.1uroporphyrinogen-III C-methyltransferase. (256 aa)
SMC98581.1Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (449 aa)
SMC99421.1Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (175 aa)
cobQAdenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (495 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (321 aa)
SMC99489.1L-threonine O-3-phosphate decarboxylase. (327 aa)
cobSCobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (246 aa)
SMC99509.1Alpha-ribazole phosphatase. (189 aa)
cobTNicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (338 aa)
SMC99542.1cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (208 aa)
SMC99549.1precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A. (254 aa)
cbiAHydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (444 aa)
SMC99567.1Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. (261 aa)
SMC99578.1Cobalt-precorrin 5A hydrolase. (126 aa)
SMC99587.1precorrin-6Y C5,15-methyltransferase (decarboxylating). (399 aa)
SMC99595.1precorrin-6A reductase. (253 aa)
SMC99604.1Precorrin-3 methyltransferase. (262 aa)
SMC99612.1Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (245 aa)
SMC99624.1precorrin-8X methylmutase. (209 aa)
SMC99630.1precorrin-3B synthase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (381 aa)
SMC99638.1Cobaltochelatase CobN subunit. (1094 aa)
SMD01051.1Short-chain dehydrogenase. (232 aa)
SMD01354.1Starvation-inducible DNA-binding protein; Belongs to the Dps family. (167 aa)
SMD02719.1Von Willebrand factor type A domain-containing protein. (381 aa)
SMD04090.1Short-chain dehydrogenase. (239 aa)
SMD04405.1uroporphyrinogen-III C-methyltransferase. (262 aa)
SMD06167.1HEXXH motif-containing protein. (286 aa)
SMD06239.1Uncharacterized protein. (383 aa)
Your Current Organism:
Novosphingobium sp. B1
NCBI taxonomy Id: 1938756
Other names: N. sp. B1
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