STRINGSTRING
CT1309 CT1309 CT1310 CT1310 CT1311 CT1311 comA2 comA2 CT1319 CT1319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CT1309Hypothetical protein; Identified by Glimmer2; putative. (171 aa)
CT1310Hypothetical protein; Identified by Glimmer2; putative. (32 aa)
CT1311Hypothetical protein; Identified by Glimmer2; putative. (173 aa)
comA2comA2 protein; Identified by similarity to EGAD:14122; match to protein family HMM PF03061; match to protein family HMM TIGR00369. (149 aa)
CT1319Hypothetical protein; Identified by Glimmer2; putative. (50 aa)
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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