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dsbD dsbD rbr-2 rbr-2 nifJ nifJ pscC pscC CT1704 CT1704 CT1734 CT1734 fld fld cydA cydA rbr-3 rbr-3 CT2026 CT2026 CT2041 CT2041 CT2042 CT2042 fccA fccA etfA etfA etfB etfB sdhB sdhB CT2285 CT2285 CT0073 CT0073 CT0075 CT0075 CT0188 CT0188 petB petB csmJ csmJ csmX csmX ndhC ndhC ndhH ndhH ndhJ ndhJ ndhG ndhG ndhE ndhE ndhF ndhF ndhD ndhD ndhB ndhB CT0778 CT0778 dsrB-1 dsrB-1 CT1013 CT1013 soxX soxX soxA soxA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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dsbDThiol:disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (607 aa)
rbr-2Rubredoxin; Serves as an electron acceptor for pyruvate ferredoxin oxidoreductase (PFOR). (52 aa)
nifJPyruvate flavodoxin/ferrodoxin oxidoreductase; Identified by similarity to EGAD:9985; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176. (1185 aa)
pscCPhotosystem P840 reaction center cytochrome c-551; Monoheme cytochrome which is the immediate electron donor to P840 of the photosynthetic reaction center complex. (206 aa)
CT1704Cytochrome c, putative; Identified by similarity to GP:6459201; similarity to EGAD:172416. (153 aa)
CT1734Cytochrome c, putative; Identified by similarity to EGAD:156571. (136 aa)
fldFlavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (168 aa)
cydACytochrome d ubiquinol oxidase, subunit I; Identified by similarity to EGAD:15777; match to protein family HMM PF01654; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. (451 aa)
rbr-3Rubredoxin; Functions as an electron acceptor for pyruvate ferredoxin oxidoreductase (PFOR); Belongs to the rubredoxin family. (53 aa)
CT2026C-type cytochrome, putative; Identified by match to protein family HMM PF00034. (156 aa)
CT2041Succinate/fumarate oxidoreductase, iron-sulfur protein, putative; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384. (345 aa)
CT2042Succinate/fumarate oxidoreductase, flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR01812. (567 aa)
fccASulfide dehydrogenase, cytochrome subunit; Monoheme cytochrome that function as the electron transport subunit of sulfide dehydrogenase. (110 aa)
etfAElectron transfer flavoprotein, alpha subunit; Identified by similarity to EGAD:45711; match to protein family HMM PF00766. (302 aa)
etfBElectron transfer flavoprotein, beta subunit; Identified by similarity to EGAD:40539; match to protein family HMM PF01012. (263 aa)
sdhBSuccinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM PF00037. (257 aa)
CT2285Rubredoxin:oxygen oxidoreductase, putative; Identified by match to protein family HMM PF00258; match to protein family HMM PF00753. (408 aa)
CT0073Cytochrome c-555, membrane-bound; Identified by similarity to EGAD:11314; match to protein family HMM PF00034. (143 aa)
CT0075Cytochrome c-555; This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It is reactive with cytochrome c oxidases but not with reductases. (108 aa)
CT0188C-type cytochrome, putative. (142 aa)
petBCytochrome b-c complex, cytochrome b subunit; Component of the green S-bacteria bc complex, which consists of the Rieske protein and cytochrome b subunit but appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential (By similarity). (428 aa)
csmJChlorosome envelope protein J; Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome. (225 aa)
csmXChlorosome envelope protein X; Identified by similarity to GP:3089164; match to protein family HMM PF00111. (221 aa)
ndhCNADH dehydrogenase I, subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (143 aa)
ndhHNADH dehydrogenase I, 20 kdA subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (189 aa)
ndhJNADH dehydrogenase I, 30 kDa subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (173 aa)
ndhGNADH dehydrogenase I, subunit 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (173 aa)
ndhENADH dehydrogenase I, subunit 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (107 aa)
ndhFNADH dehydrogenase I, subunit 5; Identified by similarity to SP:P50939; match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974. (755 aa)
ndhDNADH dehydrogenase I, subunit 4; Identified by similarity to EGAD:42981; match to protein family HMM PF00361; match to protein family HMM TIGR01972. (545 aa)
ndhBNADH dehydrogenase I, subunit 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (511 aa)
CT0778Nickel-dependent hydrogenases b-type cytochrome subunit; Identified by similarity to GP:3947716; match to protein family HMM PF01292; match to protein family HMM TIGR02125. (229 aa)
dsrB-1Sulfite reductase, dissimilatory-type, beta subunit; Identified by similarity to GP:2576394; match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02066. (359 aa)
CT1013Cytochrome c peroxidase, truncation; Identified by similarity to EGAD:38715. (56 aa)
soxXSulfur oxidation protein SoxX; Identified by similarity to GP:5541758; match to protein family HMM PF00034. (144 aa)
soxASulfur oxidation protein SoxA; C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the liberation of two electrons, which may be transferred from the SoxAX complex to another cytochrome c and which then may be used for reductive CO(2) fixation. (286 aa)
Your Current Organism:
Chlorobaculum tepidum
NCBI taxonomy Id: 194439
Other names: C. tepidum TLS, Chlorobaculum tepidum TLS, Chlorobium tepidum TLS
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