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CPE0832 CPE0832 CPE1597 CPE1597 comEC-2 comEC-2 smf smf comM comM CPE1705 CPE1705 CPE1834 CPE1834 CPE1836 CPE1836 CPE1837 CPE1837 CPE1838 CPE1838 CPE1839 CPE1839 CPE1840 CPE1840 CPE1841 CPE1841 CPE1842 CPE1842 pilC pilC tapB tapB CPE1845 CPE1845 CPE1847 CPE1847 CPE2044 CPE2044 comEA comEA comFC comFC CPE2174 CPE2174 recD recD CPE2277 CPE2277 CPE2278 CPE2278 CPE2279 CPE2279 CPE2280 CPE2280 CPE2281 CPE2281 CPE2282 CPE2282 CPE2283 CPE2283 CPE2284 CPE2284 CPE2285 CPE2285 CPE2286 CPE2286 CPE2287 CPE2287 CPE2288 CPE2288
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CPE0832317 aa, similar to pir:C69870 conserved hypothetical protein ykwD from Bacillus subtilis (257 aa); 28.7% identity in 230 aa overlap. Putative N-terminal signal sequence was found by PSORT. (317 aa)
CPE1597Hypothetical protein; 287 aa, similar to gpu:AP001520_185 BH3961 gene product from Bacillus halodurans (295 aa); 32.8% identity in 247 aa overlap. Putative N-terminal signal sequence was found by PSORT. (287 aa)
comEC-2284 aa, similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE1657. (284 aa)
smf360 aa, similar to gpu:AE004096_2 smf protein from Vibrio cholerae (371 aa); 39.3% identity in 275 aa overlap; CPE1703. (360 aa)
comMProbable competence-related protein; 507 aa, similar to pir:G72368 comM protein from Thermotoga maritima (strain MSB8) (501 aa); 45% identity in 467 aa overlap; CPE1704. (507 aa)
CPE1705122 aa, similar to pir:A82030 hypothetical protein NMA0341 from Neisseria meningitidis (group A strain Z2491) (115 aa); 28% identity in 100 aa overlap; Belongs to the UPF0102 family. (122 aa)
CPE1834Hypothetical protein; 120 aa, no significant homology. (120 aa)
CPE1836Hypothetical protein; 115 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (115 aa)
CPE1837Hypothetical protein; 146 aa, no significant homology 1 putative transmembrane region was found by PSORT. (146 aa)
CPE1838Hypothetical protein; 216 aa, no significant homology. (216 aa)
CPE1839Hypothetical protein; 136 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (136 aa)
CPE1840Hypothetical protein; 96 aa, no significant homology. (96 aa)
CPE1841Hypothetical protein; 170 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (170 aa)
CPE1842Hypothetical protein; 142 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (142 aa)
pilC339 aa, similar to pir:D70365 fimbrial assembly protein PilC from Aquifex aeolicus (408 aa); 22.5% identity in 325 aa overlap. 4 putative transmembrane regions were found by PSORT; CPE1843. (339 aa)
tapB462 aa, similar to pir:B70469 type IV pilus assembly protein TapB from Aquifex aeolicus (566 aa); 42.6% identity in 352 aa overlap; CPE1844. (462 aa)
CPE1845Hypothetical protein; 343 aa, no significant homology. (343 aa)
CPE1847575 aa, similar to pir:G69877 fibronectin-binding protein homolog yloA from Bacillus subtilis (572 aa); 39.3% identity in 573 aa overlap. (575 aa)
CPE2044Conserved hypothetical protein; 536 aa, partially similar to gpu:AP001511_224 late competence operon required for DNA binding and uptake from Bacillus halodurans (773 aa); 29.9% identity in 177 aa overlap. Putative N-terminal signal sequence and 10 putative transmembrane regions were found by PSORT. (536 aa)
comEAComE operon protein; 260 aa, similar to sp:CME1_BACSU COME OPERON PROTEIN 1 from Bacillus subtili (205 aa); 39.9% identity in 148 aa overlap. Putative N-terminal signal sequence was found by PSORT; CPE2120; late competence operon. (260 aa)
comFCcomFC protein; 219 aa, similar to gp:AE001803_4 comFC protein, putative from Thermotoga maritima (202 aa); 27.7% identity in 184 aa overlap; CPE2173; late competence protein. (219 aa)
CPE2174Hypothetical protein; 320 aa, no significant homology. (320 aa)
recDExodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (744 aa)
CPE2277Hypothetical protein; 873 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (873 aa)
CPE2278Hypothetical protein; 186 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (186 aa)
CPE2279Hypothetical protein; 702 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (702 aa)
CPE2280Hypothetical protein; 333 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (333 aa)
CPE2281Hypothetical protein; 405 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (405 aa)
CPE2282Hypothetical protein; 188 aa, no significant homology 1 putative transmembrane region was found by PSORT. (188 aa)
CPE2283384 aa, similar to pir:C75477 probable fimbrial assembly protein PilM from Deinococcus radiodurans (strain R1) (391 aa); 18.3% identity in 334 aa overlap. (384 aa)
CPE2284Hypothetical protein; 182 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (182 aa)
CPE2285401 aa, similar to pir:A75344 pilin biogenesis protein from Deinococcus radiodurans (strain R1) (406 aa); 32.3% identity in 400 aa overlap. 3 putative transmembrane regions were found by PSORT. (401 aa)
CPE2286563 aa, similar to gpu:AE004128_11 MSHA biogenesis protein MshE from Vibrio cholerae (575 aa); 41% identity in 558 aa overlap. (563 aa)
CPE2287Probable prepilin peptidase; 247 aa, partially similar to pir:A75321 prepilin peptidase, type IV from Deinococcus radiodurans (strain R1) (388 aa); 38.8% identity in 201 aa overlap. Putative N-terminal signal sequence and 5 putative transmembrane regions were found by PSORT. (247 aa)
CPE2288Prepilin peptidase dependent protein A; Not yet known. (140 aa)
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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