STRINGSTRING
CPE1842 CPE1842 CPE2278 CPE2278 CPE2280 CPE2280 CPE2284 CPE2284 CPE2288 CPE2288
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CPE1842Hypothetical protein; 142 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (142 aa)
CPE2278Hypothetical protein; 186 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (186 aa)
CPE2280Hypothetical protein; 333 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (333 aa)
CPE2284Hypothetical protein; 182 aa, no significant homology Putative N-terminal signal sequence was found by PSORT. (182 aa)
CPE2288Prepilin peptidase dependent protein A; Not yet known. (140 aa)
Your Current Organism:
Clostridium perfringens 13
NCBI taxonomy Id: 195102
Other names: C. perfringens str. 13, Clostridium perfringens str. 13
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