11 items (Clostridium perfringens ATCC 13124)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	nagH	Hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00404; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555. (1627 aa)
	nanJ	Sialidase; Identified by similarity to SP:P29767; similarity to PDB:2V73_B; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF02012; match to protein family HMM PF02973. (1173 aa)
	nanI	Sialidase; Identified by similarity to SP:Q54727; similarity to PDB:2BF6_A; match to protein family HMM PF02012; match to protein family HMM PF02973. (694 aa)
	CPF_0859	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554. (2095 aa)
	CPF_0875	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167. (1296 aa)
	nanH	Sialidase; Identified by similarity to SP:P10481; similarity to GB:CAA50436.1; match to protein family HMM PF02012. (382 aa)
	nagJ	O-GlcNAcase nagJ; Binds carbohydrates. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins. Can bind and deglycosylate O-glycosylated peptides from mammals. Belongs to the glycosyl hydrolase 84 family. (1001 aa)
	CPF_1472	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554. (1588 aa)
	CPF_1473	Conserved hypothetical protein. (587 aa)
	CPF_1487	Putative hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00746; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555; match to protein family HMM TIGR01167. (1172 aa)
	CPF_1759	BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012. (571 aa)

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0859	CPF_0875	CPF_0859	CPF_0875	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	0.741
CPF_0859	CPF_1473	CPF_0859	CPF_1473	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	Conserved hypothetical protein.	0.655
CPF_0859	CPF_1487	CPF_0859	CPF_1487	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	Putative hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00746; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	0.757
CPF_0859	CPF_1759	CPF_0859	CPF_1759	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012.	0.486
CPF_0859	nanH	CPF_0859	CPF_0985	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	Sialidase; Identified by similarity to SP:P10481; similarity to GB:CAA50436.1; match to protein family HMM PF02012.	0.467
CPF_0859	nanI	CPF_0859	CPF_0721	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	Sialidase; Identified by similarity to SP:Q54727; similarity to PDB:2BF6_A; match to protein family HMM PF02012; match to protein family HMM PF02973.	0.616
CPF_0875	CPF_0859	CPF_0875	CPF_0859	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Identified by match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF05089; match to protein family HMM PF07554.	0.741
CPF_0875	CPF_1472	CPF_0875	CPF_1472	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	0.508
CPF_0875	CPF_1473	CPF_0875	CPF_1473	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Conserved hypothetical protein.	0.621
CPF_0875	CPF_1487	CPF_0875	CPF_1487	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Putative hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00746; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	0.688
CPF_0875	nagH	CPF_0875	CPF_0184	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00404; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555.	0.690
CPF_0875	nanH	CPF_0875	CPF_0985	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Sialidase; Identified by similarity to SP:P10481; similarity to GB:CAA50436.1; match to protein family HMM PF02012.	0.580
CPF_0875	nanI	CPF_0875	CPF_0721	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Sialidase; Identified by similarity to SP:Q54727; similarity to PDB:2BF6_A; match to protein family HMM PF02012; match to protein family HMM PF02973.	0.717
CPF_0875	nanJ	CPF_0875	CPF_0532	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	Sialidase; Identified by similarity to SP:P29767; similarity to PDB:2V73_B; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF02012; match to protein family HMM PF02973.	0.753
CPF_1472	CPF_0875	CPF_1472	CPF_0875	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	0.508
CPF_1472	CPF_1473	CPF_1472	CPF_1473	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	Conserved hypothetical protein.	0.750
CPF_1472	CPF_1487	CPF_1472	CPF_1487	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	Putative hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00746; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555; match to protein family HMM TIGR01167.	0.617
CPF_1472	CPF_1759	CPF_1472	CPF_1759	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012.	0.484
CPF_1472	nagH	CPF_1472	CPF_0184	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	Hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00404; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555.	0.753
CPF_1472	nanI	CPF_1472	CPF_0721	Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554.	Sialidase; Identified by similarity to SP:Q54727; similarity to PDB:2BF6_A; match to protein family HMM PF02012; match to protein family HMM PF02973.	0.442