(42 nodes) Sperm flagellum network (Laodelphax striatellus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A482XTZ1	DHC_N2 domain-containing protein. (314 aa)
	A0A482XUU7	Enkurin domain-containing protein. (293 aa)
	A0A482XSW1	AAA_lid_1 domain-containing protein. (232 aa)
	A0A482WFR9	Uncharacterized protein. (3222 aa)
	A0A482WLU9	Uncharacterized protein. (1125 aa)
	A0A482WPL0	Uncharacterized protein. (1300 aa)
	A0A482WPT2	Uncharacterized protein. (2163 aa)
	A0A482WPW7	NDK domain-containing protein; Belongs to the NDK family. (257 aa)
	A0A482WPW8	IFT81_CH domain-containing protein. (653 aa)
	A0A482WPY2	Uncharacterized protein. (1732 aa)
	A0A482WUC2	Uncharacterized protein. (4080 aa)
	A0A482WUY6	Uncharacterized protein. (4617 aa)
	A0A482WVY1	Uncharacterized protein. (150 aa)
	A0A482WWF8	Uncharacterized protein. (426 aa)
	A0A482WWK6	Uncharacterized protein. (460 aa)
	A0A482WWN7	SPATA6 domain-containing protein. (517 aa)
	A0A482WWT3	AAA_8 domain-containing protein. (70 aa)
	A0A482WX91	Uncharacterized protein. (957 aa)
	A0A482WXF8	Uncharacterized protein. (413 aa)
	A0A482WYJ0	Uncharacterized protein. (618 aa)
	A0A482WYS4	Uncharacterized protein. (188 aa)
	A0A482WYZ6	Uncharacterized protein. (2799 aa)
	A0A482WZE9	DHC_N2 domain-containing protein. (1158 aa)
	A0A482X1Y9	Uncharacterized protein. (624 aa)
	A0A482X3K5	Uncharacterized protein. (504 aa)
	A0A482X6X9	Calponin-homology (CH) domain-containing protein. (1578 aa)
	A0A482X7S1	Uncharacterized protein. (282 aa)
	A0A482XAP7	DRBM domain-containing protein. (2116 aa)
	A0A482XB21	Uncharacterized protein. (1300 aa)
	A0A482XDH3	AAA_6 domain-containing protein. (379 aa)
	A0A482XSV8	Uncharacterized protein. (3648 aa)
	A0A482XSB7	Uncharacterized protein. (1979 aa)
	A0A482XQI9	IFT81_CH domain-containing protein. (261 aa)
	A0A482XQ55	Uncharacterized protein. (193 aa)
	A0A482XPY1	Uncharacterized protein. (3968 aa)
	A0A482XNH2	Uncharacterized protein. (536 aa)
	A0A482XNA8	Uncharacterized protein. (1263 aa)
	A0A482XII4	AAA_9 domain-containing protein. (391 aa)
	A0A482XG66	Uncharacterized protein. (252 aa)
	A0A482XG02	Uncharacterized protein. (4846 aa)
	A0A482XFE8	ASH domain-containing protein. (313 aa)
	A0A482XDK2	Uncharacterized protein. (1578 aa)

Your Current Organism:

Laodelphax striatellus

NCBI taxonomy Id: 195883
Other names: L. striatellus, Laodelphax striatella, small brown planthopper

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A482WFR9	A0A482XAP7	Uncharacterized protein.	DRBM domain-containing protein.	0.478
A0A482WFR9	A0A482XB21	Uncharacterized protein.	Uncharacterized protein.	0.920
A0A482WFR9	A0A482XII4	Uncharacterized protein.	AAA_9 domain-containing protein.	0.904
A0A482WLU9	A0A482WPL0	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A482WLU9	A0A482WPW8	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.444
A0A482WLU9	A0A482XFE8	Uncharacterized protein.	ASH domain-containing protein.	0.435
A0A482WLU9	A0A482XQI9	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.444
A0A482WLU9	A0A482XUU7	Uncharacterized protein.	Enkurin domain-containing protein.	0.405
A0A482WPL0	A0A482WLU9	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A482WPT2	A0A482WPY2	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A482WPT2	A0A482WZE9	Uncharacterized protein.	DHC_N2 domain-containing protein.	0.934
A0A482WPT2	A0A482X7S1	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A482WPT2	A0A482XAP7	Uncharacterized protein.	DRBM domain-containing protein.	0.478
A0A482WPT2	A0A482XDH3	Uncharacterized protein.	AAA_6 domain-containing protein.	0.949
A0A482WPT2	A0A482XTZ1	Uncharacterized protein.	DHC_N2 domain-containing protein.	0.712
A0A482WPW7	A0A482WVY1	NDK domain-containing protein; Belongs to the NDK family.	Uncharacterized protein.	0.493
A0A482WPW7	A0A482WWF8	NDK domain-containing protein; Belongs to the NDK family.	Uncharacterized protein.	0.493
A0A482WPW7	A0A482WWK6	NDK domain-containing protein; Belongs to the NDK family.	Uncharacterized protein.	0.493
A0A482WPW7	A0A482XUU7	NDK domain-containing protein; Belongs to the NDK family.	Enkurin domain-containing protein.	0.709
A0A482WPW8	A0A482WLU9	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.444