(5 nodes) Polyubiquitin modification-dependent protein binding, and Derlin network (Microdochium bolleyi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A136J0T6	UBA/TS-N domain-containing protein. (309 aa)
	A0A136J6B0	Uncharacterized protein. (275 aa)
	A0A136J856	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (251 aa)
	A0A136JB74	XPC-binding domain-domain-containing protein. (383 aa)
	A0A136JG20	TGc domain-containing protein. (475 aa)

Your Current Organism:

Microdochium bolleyi

NCBI taxonomy Id: 196109
Other names: M. bolleyi

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A136J0T6	A0A136J6B0	UBA/TS-N domain-containing protein.	Uncharacterized protein.	0.852
A0A136J0T6	A0A136J856	UBA/TS-N domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.993
A0A136J0T6	A0A136JB74	UBA/TS-N domain-containing protein.	XPC-binding domain-domain-containing protein.	0.793
A0A136J0T6	A0A136JG20	UBA/TS-N domain-containing protein.	TGc domain-containing protein.	0.983
A0A136J6B0	A0A136J0T6	Uncharacterized protein.	UBA/TS-N domain-containing protein.	0.852
A0A136J6B0	A0A136J856	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.808
A0A136J6B0	A0A136JB74	Uncharacterized protein.	XPC-binding domain-domain-containing protein.	0.785
A0A136J6B0	A0A136JG20	Uncharacterized protein.	TGc domain-containing protein.	0.793
A0A136J856	A0A136J0T6	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	UBA/TS-N domain-containing protein.	0.993
A0A136J856	A0A136J6B0	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.808
A0A136J856	A0A136JB74	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	XPC-binding domain-domain-containing protein.	0.759
A0A136J856	A0A136JG20	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	TGc domain-containing protein.	0.868
A0A136JB74	A0A136J0T6	XPC-binding domain-domain-containing protein.	UBA/TS-N domain-containing protein.	0.793
A0A136JB74	A0A136J6B0	XPC-binding domain-domain-containing protein.	Uncharacterized protein.	0.785
A0A136JB74	A0A136J856	XPC-binding domain-domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.759
A0A136JB74	A0A136JG20	XPC-binding domain-domain-containing protein.	TGc domain-containing protein.	0.996
A0A136JG20	A0A136J0T6	TGc domain-containing protein.	UBA/TS-N domain-containing protein.	0.983
A0A136JG20	A0A136J6B0	TGc domain-containing protein.	Uncharacterized protein.	0.793
A0A136JG20	A0A136J856	TGc domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.868
A0A136JG20	A0A136JB74	TGc domain-containing protein.	XPC-binding domain-domain-containing protein.	0.996