STRINGSTRING
Noca_0228 Noca_0228 Noca_0229 Noca_0229 Noca_0230 Noca_0230 Noca_0231 Noca_0231 Noca_0232 Noca_0232
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Noca_0228PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mmc:Mmcs_0489 carbon-monoxide dehydrogenase. (291 aa)
Noca_0229Carbon monoxide dehydrogenase, small subunit; PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rxy:Rxyl_0111 (2Fe-2S)-binding protein. (181 aa)
Noca_0230Xanthine dehydrogenase, molybdenum binding subunit apoprotein; KEGG: rha:RHA1_ro05232 possible carbon monoxide dehydrogenase; TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding. (804 aa)
Noca_0231PFAM: protein of unknown function DUF182; YHS domain protein; SMART: TRASH domain protein; KEGG: rha:RHA1_ro05233 hypothetical protein. (299 aa)
Noca_0232PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rha:RHA1_ro05235 hypothetical protein. (198 aa)
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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