STRINGSTRING
Noca_2078 Noca_2078 Noca_0201 Noca_0201 Noca_1301 Noca_1301 Noca_3207 Noca_3207
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Noca_2078PFAM: isochorismatase hydrolase; KEGG: cps:CPS_1616 isochorismatase family protein. (214 aa)
Noca_0201PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_C7071 isochorismatase hydrolase. (198 aa)
Noca_1301PFAM: isochorismatase hydrolase; KEGG: mmc:Mmcs_5114 isochorismatase hydrolase. (194 aa)
Noca_3207PFAM: isochorismatase hydrolase; KEGG: eca:ECA2383 putative isochorismatase. (250 aa)
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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