(6 nodes) Thioesterase domain network (Streptomyces olivochromogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KUN40810.1	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (7994 aa)
	ppsD	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2225 aa)
	KUN39667.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2669 aa)
	KUN45320.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1087 aa)
	KUN45311.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3726 aa)
	KUN46421.1	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1082 aa)

Your Current Organism:

Streptomyces olivochromogenes

NCBI taxonomy Id: 1963
Other names: ATCC 25479, ATCC 3336, Actinomyces olivochromogenus, CBS 889.69, DSM 40451, IFO 13067, IFO 3178, IMET 40352, ISP 5451, JCM 4163, JCM 4500, KCTC 9064, NBRC 13067, NBRC 3178, NRRL-ISP 5451, S. olivochromogenes, Streptomyces olivichromogenes, Streptomyces olivochromogenus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KUN39667.1	KUN40810.1	AQJ27_41875	AQJ27_40865	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KUN39667.1	KUN45311.1	AQJ27_41875	AQJ27_20325	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KUN39667.1	KUN45320.1	AQJ27_41875	AQJ27_20395	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
KUN39667.1	KUN46421.1	AQJ27_41875	AQJ27_17095	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KUN39667.1	ppsD	AQJ27_41875	AQJ27_50650	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KUN40810.1	KUN39667.1	AQJ27_40865	AQJ27_41875	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KUN40810.1	KUN45311.1	AQJ27_40865	AQJ27_20325	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
KUN40810.1	KUN45320.1	AQJ27_40865	AQJ27_20395	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
KUN40810.1	KUN46421.1	AQJ27_40865	AQJ27_17095	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KUN40810.1	ppsD	AQJ27_40865	AQJ27_50650	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KUN45311.1	KUN39667.1	AQJ27_20325	AQJ27_41875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KUN45311.1	KUN40810.1	AQJ27_20325	AQJ27_40865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
KUN45311.1	KUN45320.1	AQJ27_20325	AQJ27_20395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
KUN45311.1	KUN46421.1	AQJ27_20325	AQJ27_17095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
KUN45311.1	ppsD	AQJ27_20325	AQJ27_50650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KUN45320.1	KUN39667.1	AQJ27_20395	AQJ27_41875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
KUN45320.1	KUN40810.1	AQJ27_20395	AQJ27_40865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
KUN45320.1	KUN45311.1	AQJ27_20395	AQJ27_20325	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
KUN45320.1	KUN46421.1	AQJ27_20395	AQJ27_17095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
KUN45320.1	ppsD	AQJ27_20395	AQJ27_50650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997

page 1 of 2

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About