STRINGSTRING
GCA_000729995_00212 GCA_000729995_00212 GCA_000729995_00287 GCA_000729995_00287 GCA_000729995_00375 GCA_000729995_00375 GCA_000729995_00377 GCA_000729995_00377 GCA_000729995_00408 GCA_000729995_00408 DFH23_04007 DFH23_04007 DFH23_03926 DFH23_03926 DFH23_05032 DFH23_05032 DFH23_05033 DFH23_05033 DFH23_05034 DFH23_05034 DFH23_08616 DFH23_08616 GCA_000729995_01482 GCA_000729995_01482 GCA_000729995_01485 GCA_000729995_01485 GCA_000729995_01487 GCA_000729995_01487 GCA_000729995_01488 GCA_000729995_01488 GCA_000729995_01489 GCA_000729995_01489 GCA_000729995_01490 GCA_000729995_01490 GCA_000729995_01492 GCA_000729995_01492 GCA_000729995_01493 GCA_000729995_01493 DFH23_08491 DFH23_08491 GCA_000729995_01827 GCA_000729995_01827 GCA_000729995_01994 GCA_000729995_01994 GCA_000729995_02035 GCA_000729995_02035 GCA_000729995_02036 GCA_000729995_02036 GCA_000729995_02037 GCA_000729995_02037 GCA_000729995_02038 GCA_000729995_02038 GCA_000729995_02046 GCA_000729995_02046 GCA_000729995_02296 GCA_000729995_02296 GCA_000729995_02470 GCA_000729995_02470 DFH23_01445 DFH23_01445 DFH23_02288 DFH23_02288 DFH23_02287 DFH23_02287 DFH23_02286 DFH23_02286 acpP acpP DFH23_02284 DFH23_02284 DFH23_02283 DFH23_02283 DFH23_02282 DFH23_02282 DFH23_02281 DFH23_02281 DFH23_02280 DFH23_02280 DFH23_02279 DFH23_02279 DFH23_02278 DFH23_02278 DFH23_02277 DFH23_02277 DFH23_02276 DFH23_02276 DFH23_02275 DFH23_02275 DFH23_02274 DFH23_02274 DFH23_02273 DFH23_02273 GCA_000729995_03069 GCA_000729995_03069 DFH23_02271 DFH23_02271 DFH23_02229 DFH23_02229 DFH23_07313 DFH23_07313 DFH23_02538 DFH23_02538 DFH23_07981 DFH23_07981 DFH23_07979 DFH23_07979 DFH23_07978 DFH23_07978 GCA_000729995_03805 GCA_000729995_03805 GCA_000729995_03852 GCA_000729995_03852 GCA_000729995_03853 GCA_000729995_03853 DFH23_07152 DFH23_07152 DFH23_07151 DFH23_07151 DFH23_07148 DFH23_07148 DFH23_00556 DFH23_00556 DFH23_00557 DFH23_00557 DFH23_00659 DFH23_00659 DFH23_00660 DFH23_00660 DFH23_00661 DFH23_00661 DFH23_06521 DFH23_06521 GCA_000729995_05475 GCA_000729995_05475 GCA_000729995_05476 GCA_000729995_05476 GCA_000729995_05477 GCA_000729995_05477 DFH23_00859 DFH23_00859 GCA_000729995_06209 GCA_000729995_06209 GCA_000729995_06231 GCA_000729995_06231 GCA_000729995_06232 GCA_000729995_06232 GCA_000729995_06245 GCA_000729995_06245 accD accD DFH23_00468 DFH23_00468 GCA_000729995_06590 GCA_000729995_06590 GCA_000729995_06591 GCA_000729995_06591 GCA_000729995_06592 GCA_000729995_06592 GCA_000729995_06682 GCA_000729995_06682 DFH23_06924 DFH23_06924 GCA_000729995_06735 GCA_000729995_06735 DFH23_00178 DFH23_00178 DFH23_00177 DFH23_00177 DFH23_10684 DFH23_10684 DFH23_01129 DFH23_01129 acpP-2 acpP-2 DFH23_01127 DFH23_01127 DFH23_01126 DFH23_01126 fabH fabH plsX plsX accA accA DFH23_02791 DFH23_02791 DFH23_02776 DFH23_02776 fabZ fabZ DFH23_00004 DFH23_00004 DFH23_04816 DFH23_04816 GCA_000729995_08669 GCA_000729995_08669 DFH23_08379 DFH23_08379
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000729995_00212Unannotated protein. (952 aa)
GCA_000729995_00287Unannotated protein. (377 aa)
GCA_000729995_00375Unannotated protein. (371 aa)
GCA_000729995_00377Unannotated protein. (534 aa)
GCA_000729995_00408Unannotated protein. (571 aa)
DFH23_04007Unannotated protein. (321 aa)
DFH23_03926Unannotated protein. (315 aa)
DFH23_05032Unannotated protein. (393 aa)
DFH23_05033Unannotated protein. (535 aa)
DFH23_05034Unannotated protein. (673 aa)
DFH23_08616Unannotated protein. (820 aa)
GCA_000729995_01482Unannotated protein. (562 aa)
GCA_000729995_01485Unannotated protein. (2593 aa)
GCA_000729995_01487Unannotated protein. (85 aa)
GCA_000729995_01488Unannotated protein. (335 aa)
GCA_000729995_01489Unannotated protein. (2218 aa)
GCA_000729995_01490Unannotated protein. (3749 aa)
GCA_000729995_01492Unannotated protein. (279 aa)
GCA_000729995_01493Unannotated protein. (74 aa)
DFH23_08491Unannotated protein. (358 aa)
GCA_000729995_01827Unannotated protein. (431 aa)
GCA_000729995_01994Unannotated protein. (546 aa)
GCA_000729995_02035Unannotated protein. (484 aa)
GCA_000729995_02036Unannotated protein. (457 aa)
GCA_000729995_02037Unannotated protein. (171 aa)
GCA_000729995_02038Unannotated protein. (484 aa)
GCA_000729995_02046Unannotated protein. (408 aa)
GCA_000729995_02296Unannotated protein. (553 aa)
GCA_000729995_02470Unannotated protein. (410 aa)
DFH23_01445Unannotated protein. (644 aa)
DFH23_02288Unannotated protein. (257 aa)
DFH23_02287Unannotated protein. (273 aa)
DFH23_02286Unannotated protein. (101 aa)
acpPUnannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (83 aa)
DFH23_02284Unannotated protein. (220 aa)
DFH23_02283Unannotated protein. (562 aa)
DFH23_02282Unannotated protein. (573 aa)
DFH23_02281Unannotated protein. (542 aa)
DFH23_02280Unannotated protein. (145 aa)
DFH23_02279Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (215 aa)
DFH23_02278Unannotated protein. (802 aa)
DFH23_02277Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (394 aa)
DFH23_02276Unannotated protein. (163 aa)
DFH23_02275Unannotated protein. (241 aa)
DFH23_02274Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (408 aa)
DFH23_02273Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (414 aa)
GCA_000729995_03069Unannotated protein. (145 aa)
DFH23_02271Unannotated protein. (415 aa)
DFH23_02229Unannotated protein. (552 aa)
DFH23_07313Unannotated protein; Belongs to the cytochrome P450 family. (399 aa)
DFH23_02538Unannotated protein. (385 aa)
DFH23_07981Unannotated protein. (309 aa)
DFH23_07979Unannotated protein. (272 aa)
DFH23_07978Unannotated protein. (281 aa)
GCA_000729995_03805Unannotated protein. (521 aa)
GCA_000729995_03852Unannotated protein. (469 aa)
GCA_000729995_03853Unannotated protein. (80 aa)
DFH23_07152Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (149 aa)
DFH23_07151Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
DFH23_07148Unannotated protein. (140 aa)
DFH23_00556Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (460 aa)
DFH23_00557Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (161 aa)
DFH23_00659Unannotated protein. (511 aa)
DFH23_00660Unannotated protein. (383 aa)
DFH23_00661Unannotated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (175 aa)
DFH23_06521Unannotated protein. (655 aa)
GCA_000729995_05475Unannotated protein. (104 aa)
GCA_000729995_05476Unannotated protein. (540 aa)
GCA_000729995_05477Unannotated protein. (446 aa)
DFH23_00859Unannotated protein. (196 aa)
GCA_000729995_06209Unannotated protein. (650 aa)
GCA_000729995_06231Unannotated protein. (643 aa)
GCA_000729995_06232Unannotated protein. (535 aa)
GCA_000729995_06245Unannotated protein. (526 aa)
accDUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (290 aa)
DFH23_00468Unannotated protein. (557 aa)
GCA_000729995_06590Unannotated protein. (240 aa)
GCA_000729995_06591Unannotated protein. (3293 aa)
GCA_000729995_06592Unannotated protein. (776 aa)
GCA_000729995_06682Unannotated protein. (404 aa)
DFH23_06924Unannotated protein. (2429 aa)
GCA_000729995_06735Unannotated protein. (529 aa)
DFH23_00178Unannotated protein. (368 aa)
DFH23_00177Unannotated protein. (536 aa)
DFH23_10684Unannotated protein. (559 aa)
DFH23_01129Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
acpP-2Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (79 aa)
DFH23_01127Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
DFH23_01126Unannotated protein. (310 aa)
fabHUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (329 aa)
plsXUnannotated protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (390 aa)
accAUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (323 aa)
DFH23_02791Unannotated protein. (265 aa)
DFH23_02776Unannotated protein. (154 aa)
fabZUnannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (157 aa)
DFH23_00004Unannotated protein. (576 aa)
DFH23_04816Unannotated protein. (231 aa)
GCA_000729995_08669Unannotated protein. (384 aa)
DFH23_08379Unannotated protein. (538 aa)
Your Current Organism:
Caballeronia sordidicola
NCBI taxonomy Id: 196367
Other names: Burkholderia sordidicola, Burkholderia sp. KOPRI26592, Burkholderia sp. KOPRI26633, Burkholderia sp. PAMC 26510, Burkholderia sp. PAMC 26577, C. sordidicola, CCUG 49583, Caballeronia sordidicola (Lim et al. 2003) Dobritsa and Samadpour 2016, JCM 11778, KCTC 12081, Paraburkholderia sordidicola, Paraburkholderia sordidicola (Lim et al. 2003) Sawana et al. 2015, strain S5-B
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