STRINGSTRING
GCA_000729995_06591 GCA_000729995_06591 DFH23_06924 DFH23_06924 GCA_000729995_06592 GCA_000729995_06592 GCA_000729995_01490 GCA_000729995_01490 GCA_000729995_01489 GCA_000729995_01489 GCA_000729995_01485 GCA_000729995_01485
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000729995_06591Unannotated protein. (3293 aa)
DFH23_06924Unannotated protein. (2429 aa)
GCA_000729995_06592Unannotated protein. (776 aa)
GCA_000729995_01490Unannotated protein. (3749 aa)
GCA_000729995_01489Unannotated protein. (2218 aa)
GCA_000729995_01485Unannotated protein. (2593 aa)
Your Current Organism:
Caballeronia sordidicola
NCBI taxonomy Id: 196367
Other names: Burkholderia sordidicola, Burkholderia sp. KOPRI26592, Burkholderia sp. KOPRI26633, Burkholderia sp. PAMC 26510, Burkholderia sp. PAMC 26577, C. sordidicola, CCUG 49583, Caballeronia sordidicola (Lim et al. 2003) Dobritsa and Samadpour 2016, JCM 11778, KCTC 12081, Paraburkholderia sordidicola, Paraburkholderia sordidicola (Lim et al. 2003) Sawana et al. 2015, strain S5-B
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