STRINGSTRING
rpmJ rpmJ rpmA rpmA ribA ribA zupT zupT rpmE rpmE rpmB rpmB adhA adhA rpmG rpmG hemB hemB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpmJRibosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (40 aa)
rpmA50S RIBOSOMAL PROTEIN L27; Belongs to the bacterial ribosomal protein bL27 family. (88 aa)
ribAPUTATIVE GTP CYCLOHYDROLASE II/3,4-DIHYDROXY-2-BUTANONE-4-PHOSPHATESYNTHASE; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. (422 aa)
zupTPredicted divalent heavy-metal cations transporter; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. (268 aa)
rpmEPROBABLE 50S RIBOSOMAL SUBUNIT PROTEIN L31. (88 aa)
rpmB50S RIBOSOMAL PROTEIN L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
adhAZn-dependent alcohol dehydrogenase. (345 aa)
rpmG50S RIBOSOMAL PROTEIN L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
hemBDELTA-AMINOLEVULINIC ACID DEHYDRATASE; Belongs to the ALAD family. (339 aa)
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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