Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cgl2135 | pta | cg2343 | cg3048 | Decarboxylase. | PHOSPHATE ACETYLTRANSFERASE; Belongs to the phosphate acetyltransferase and butyryltransferase family. | 0.458 |
| Cgl2153 | gltS | cg2364 | cg1463 | Pyridoxal-5'-phosphate dependent enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis. | PUTATIVE GLUTAMYL-TRNA SYNTHETASE; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.433 |
| Cgl2594 | dctA | cg2869 | cg2870 | Predicted deacetylase. | Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.669 |
| aceA | icd | cg2560 | cg0766 | ISOCITRATE LYASE; Involved in the metabolic adaptation in response to environmental changes. Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates. | ISOCITRATE DEHYDROGENASE; Belongs to the monomeric-type IDH family. | 0.704 |
| aceA | odhA | cg2560 | cg1280 | ISOCITRATE LYASE; Involved in the metabolic adaptation in response to environmental changes. Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates. | 2-OXOGLUTARATE DEHYDROGENASE; Catalyzes the E1 and E2 reactions as part of 2-oxoglutarate dehydrogenase (ODH) activity, to convert 2-oxoglutarate to succinyl-CoA and CO(2). OdhA has reductase activity with 2-oxoglutarate but does not react with pyruvate, and also displays transsuccinylase but no transacetylase activity. Since OdhA is not lipoylated, the succinyltransferase activity of its E2 domain is dependent on lipoyl residues of the acetyltransferase AceF. | 0.648 |
| aceA | pta | cg2560 | cg3048 | ISOCITRATE LYASE; Involved in the metabolic adaptation in response to environmental changes. Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates. | PHOSPHATE ACETYLTRANSFERASE; Belongs to the phosphate acetyltransferase and butyryltransferase family. | 0.978 |
| aceA | sucB | cg2560 | cg2421 | ISOCITRATE LYASE; Involved in the metabolic adaptation in response to environmental changes. Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates. | DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE; Is essential for both 2-oxoglutarate dehydrogenase (ODH) and pyruvate dehydrogenase (PDH) activities, but AceF has exclusively transacetylase (and no transsuccinylase) activity. The lipoyl residues required for ODH activity are likely provided by AceF. Belongs to the 2-oxoacid dehydrogenase family. | 0.422 |
| ccsA | dtxR | cg0522 | cg2103 | Cytochrome c biogenesis protein transmembrane prot. | IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). Represses ripA under iron excess. | 0.444 |
| ccsA | hemA | cg0522 | cg0497 | Cytochrome c biogenesis protein transmembrane prot. | GLUTAMYL-TRNA REDUCTASE; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.683 |
| ccsA | hemB | cg0522 | cg0512 | Cytochrome c biogenesis protein transmembrane prot. | DELTA-AMINOLEVULINIC ACID DEHYDRATASE; Belongs to the ALAD family. | 0.471 |
| ccsA | hemD | cg0522 | cg0510 | Cytochrome c biogenesis protein transmembrane prot. | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | 0.626 |
| ccsA | hemE | cg0522 | cg0516 | Cytochrome c biogenesis protein transmembrane prot. | UROPORPHYRINOGEN DECARBOXYLASE; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.880 |
| ccsA | hemL | cg0522 | cg0518 | Cytochrome c biogenesis protein transmembrane prot. | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE. | 0.963 |
| dctA | Cgl2594 | cg2870 | cg2869 | Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Predicted deacetylase. | 0.669 |
| dtxR | ccsA | cg2103 | cg0522 | IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). Represses ripA under iron excess. | Cytochrome c biogenesis protein transmembrane prot. | 0.444 |
| dtxR | hemA | cg2103 | cg0497 | IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). Represses ripA under iron excess. | GLUTAMYL-TRNA REDUCTASE; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.723 |
| dtxR | hemE | cg2103 | cg0516 | IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). Represses ripA under iron excess. | UROPORPHYRINOGEN DECARBOXYLASE; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.648 |
| dtxR | hemL | cg2103 | cg0518 | IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). Represses ripA under iron excess. | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE. | 0.662 |
| gltS | Cgl2153 | cg1463 | cg2364 | PUTATIVE GLUTAMYL-TRNA SYNTHETASE; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | Pyridoxal-5'-phosphate dependent enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis. | 0.433 |
| gltS | gltX | cg1463 | cg0289 | PUTATIVE GLUTAMYL-TRNA SYNTHETASE; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | GLUTAMYL-TRNA SYNTHETASE-RELATED PROTEIN; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.921 |
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