66 items (Acinetobacter sp. ANC4204) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OTG56092.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	betA	Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (554 aa)
	OTG60998.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	OTG61009.1	Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
	mnmG	Hypothetical protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (626 aa)
	dld	D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. (564 aa)
	OTG61107.1	FAD-dependent monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	OTG61108.1	2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
	OTG61553.1	acyl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	OTG61171.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
	OTG61194.1	Alkyl hydroperoxide reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
	OTG61278.1	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	OTG61337.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	OTG61379.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
	OTG61382.1	Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (632 aa)
	OTG61568.1	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
	OTG61394.1	Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
	OTG61425.1	NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
	OTG61541.1	FAD-containing monooxygenase EthA; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
	OTG59852.1	NAD(P)(+) transhydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
	OTG59854.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (824 aa)
	OTG59857.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
	OTG60456.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
	OTG59918.1	Nitrite reductase (NAD(P)H); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (848 aa)
	mhpA	3-(3-hydroxyphenyl)propionate hydroxylase; Catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
	OTG60067.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (884 aa)
	OTG60096.1	Oleate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
	OTG60146.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
	OTG60147.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
	OTG60161.1	GMC oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
	OTG60285.1	Flavodoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
	OTG60317.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
	dusC	tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily. (311 aa)
	OTG59242.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	OTG59244.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	OTG59305.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
	OTG59330.1	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
	OTG58576.1	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
	OTG58652.1	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	OTG58653.1	SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	OTG58679.1	Alkyl hydroperoxide reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
	dusB	tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. (341 aa)
	OTG58778.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
	OTG58078.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	OTG58125.1	Magnesium/cobalt efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	B9T36_11810	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	OTG58276.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	dusA	tRNA dihydrouridine(20/20a) synthase DusA; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (339 aa)
	OTG58007.1	DNA alkylation response protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
	OTG57428.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
	OTG57439.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
	murB	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (345 aa)
	OTG57488.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
	OTG57496.1	4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
	OTG57136.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	OTG56839.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	OTG56840.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
	OTG56888.1	Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)
	mnmC	FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. (635 aa)
	OTG56922.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
	OTG56418.1	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	OTG56432.1	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
	OTG56444.1	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
	OTG56448.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	OTG56540.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
	OTG56541.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)

Your Current Organism:

Acinetobacter sp. ANC4204

NCBI taxonomy Id: 1977884
Other names: A. sp. ANC 4204, Acinetobacter sp. ANC 4204

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9T36_11810	OTG57428.1	B9T36_11810	B9T36_13860	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
B9T36_11810	OTG60285.1	B9T36_11810	B9T36_06580	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flavodoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
OTG56092.1	OTG61278.1	B9T36_17225	B9T36_02440	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
OTG56418.1	OTG56888.1	B9T36_16445	B9T36_16060	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
OTG56418.1	OTG56922.1	B9T36_16445	B9T36_16240	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
OTG56418.1	OTG58078.1	B9T36_16445	B9T36_11415	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
OTG56418.1	OTG61379.1	B9T36_16445	B9T36_03005	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
OTG56418.1	OTG61382.1	B9T36_16445	B9T36_03025	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase flavoprotein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.	0.449
OTG56432.1	OTG56444.1	B9T36_16525	B9T36_16585	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
OTG56432.1	OTG61009.1	B9T36_16525	B9T36_00935	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
OTG56432.1	mhpA	B9T36_16525	B9T36_05275	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-(3-hydroxyphenyl)propionate hydroxylase; Catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
OTG56444.1	OTG56432.1	B9T36_16585	B9T36_16525	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
OTG56444.1	OTG57428.1	B9T36_16585	B9T36_13860	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
OTG56444.1	OTG60285.1	B9T36_16585	B9T36_06580	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flavodoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
OTG56444.1	mhpA	B9T36_16585	B9T36_05275	Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-(3-hydroxyphenyl)propionate hydroxylase; Catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469
OTG56448.1	OTG56541.1	B9T36_16605	B9T36_17120	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
OTG56448.1	OTG56922.1	B9T36_16605	B9T36_16240	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
OTG56448.1	OTG57439.1	B9T36_16605	B9T36_13915	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
OTG56448.1	OTG59854.1	B9T36_16605	B9T36_04165	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
OTG56448.1	OTG61278.1	B9T36_16605	B9T36_02440	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851