STRINGSTRING
ARK06522.1 ARK06522.1 ARK03814.1 ARK03814.1 ARK03816.1 ARK03816.1 ARK03820.1 ARK03820.1 ARK03854.1 ARK03854.1 ARK03855.1 ARK03855.1 ARK03856.1 ARK03856.1 ARK03857.1 ARK03857.1 ARK03858.1 ARK03858.1 ARK03859.1 ARK03859.1 ARK03860.1 ARK03860.1 ARK03919.1 ARK03919.1 ARK04074.1 ARK04074.1 ARK06641.1 ARK06641.1 ARK04355.1 ARK04355.1 ARK04380.1 ARK04380.1 ARK04381.1 ARK04381.1 ARK04382.1 ARK04382.1 ARK06675.1 ARK06675.1 ARK04383.1 ARK04383.1 ARK04384.1 ARK04384.1 ARK05683.1 ARK05683.1 ARK06408.1 ARK06408.1 csrA csrA ARK06411.1 ARK06411.1 flhA flhA ARK06413.1 ARK06413.1 ARK06414.1 ARK06414.1 fliQ fliQ fliP fliP ARK06417.1 ARK06417.1 ARK06418.1 ARK06418.1 ARK06419.1 ARK06419.1 ARK06420.1 ARK06420.1 ARK06421.1 ARK06421.1 ARK06422.1 ARK06422.1 ARK06423.1 ARK06423.1 ARK06424.1 ARK06424.1 ARK06425.1 ARK06425.1 ARK06426.1 ARK06426.1 ARK06427.1 ARK06427.1 ARK06428.1 ARK06428.1 ARK06429.1 ARK06429.1 ARK06430.1 ARK06430.1 ARK06431.1 ARK06431.1 fliE fliE ARK06432.1 ARK06432.1 ARK06433.1 ARK06433.1 ARK06434.1 ARK06434.1 ARK06435.1 ARK06435.1 ARK06436.1 ARK06436.1 ARK06437.1 ARK06437.1 ARK06438.1 ARK06438.1 ARK06439.1 ARK06439.1 ARK06440.1 ARK06440.1 ARK07034.1 ARK07034.1 flgK flgK ARK07035.1 ARK07035.1 ARK06442.1 ARK06442.1 ARK06443.1 ARK06443.1 ARK06444.1 ARK06444.1 ARK06445.1 ARK06445.1 ARK06446.1 ARK06446.1 ARK06447.1 ARK06447.1 cheB cheB ARK06449.1 ARK06449.1 ARK06450.1 ARK06450.1 ARK06451.1 ARK06451.1 ARK06452.1 ARK06452.1 ARK07044.1 ARK07044.1 ARK06488.1 ARK06488.1 ARK06489.1 ARK06489.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARK06522.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
ARK03814.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (725 aa)
ARK03816.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (107 aa)
ARK03820.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
ARK03854.1Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (623 aa)
ARK03855.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (174 aa)
ARK03856.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. (111 aa)
ARK03857.1Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (671 aa)
ARK03858.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
ARK03859.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
ARK03860.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
ARK03919.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
ARK04074.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (588 aa)
ARK06641.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
ARK04355.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (110 aa)
ARK04380.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
ARK04381.1Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
ARK04382.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
ARK06675.1Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
ARK04383.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
ARK04384.1Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
ARK05683.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
ARK06408.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (316 aa)
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (79 aa)
ARK06411.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (279 aa)
flhAEscV/YscV/HrcV family type III secretion system export apparatus protein; Membrane protein involved in the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
ARK06413.1Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
ARK06414.1Flagellar biosynthetic protein FliR; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (91 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (280 aa)
ARK06417.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
ARK06418.1Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
ARK06419.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
ARK06420.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
ARK06421.1Motility protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
ARK06422.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
ARK06423.1Flagellar hook protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
ARK06424.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
ARK06425.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
ARK06426.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
ARK06427.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (144 aa)
ARK06428.1EscN/YscN/HrcN family type III secretion system ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
ARK06429.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
ARK06430.1Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
ARK06431.1Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (542 aa)
fliEFlagellar hook-basal body complex protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
ARK06432.1Flagellar basal-body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. (130 aa)
ARK06433.1Flagellar biosynthesis protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (114 aa)
ARK06434.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (105 aa)
ARK06435.1Flagellar export chaperone FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
ARK06436.1Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (461 aa)
ARK06437.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (284 aa)
ARK06438.1Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (285 aa)
ARK06439.1Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (287 aa)
ARK06440.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (266 aa)
ARK07034.1Flagellar protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
flgKFlagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
ARK07035.1Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (284 aa)
ARK06442.1Flagellar assembly protein FliW; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
ARK06443.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (162 aa)
ARK06444.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
ARK06445.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
ARK06446.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
ARK06447.1Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (350 aa)
ARK06449.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
ARK06450.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)
ARK06451.1Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
ARK06452.1Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa)
ARK07044.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)
ARK06488.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
ARK06489.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (767 aa)
Your Current Organism:
Cellulosimicrobium sp. TH20
NCBI taxonomy Id: 1980001
Other names: C. sp. TH-20, Cellulosimicrobium sp. TH-20
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