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yebS_1 yebS_1 pqiA pqiA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yebS_1PqiA family integral membrane protein; Similar to Escherichia coli K12 conserved hypothetical protein gi: 1788138 (880 aa). BLAST with identity of 97% in 875 aa. This CDS contains an in-frame stop codon. The sequence has been checked and is believed to be correct. (427 aa)
pqiAParaquat-inducible protein A; Component of a transport pathway that contributes to membrane integrity. (417 aa)
Your Current Organism:
Shigella flexneri
NCBI taxonomy Id: 198214
Other names: S. flexneri 2a str. 301, Shigella flexneri 2a str. 301, Shigella flexneri serotype 2a str. 301
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