STRINGSTRING
eno eno yjiR yjiR ADN00474.1 ADN00474.1 pehX pehX pehW pehW pehV pehV mpl mpl ADM97671.1 ADM97671.1 ADM97669.1 ADM97669.1 ADM97660.1 ADM97660.1 ADM96955.1 ADM96955.1 ADM96651.1 ADM96651.1 rhiE rhiE prtG prtG vgrGA vgrGA ydcR ydcR ADM97345.1 ADM97345.1 yajI yajI ADM96320.1 ADM96320.1 celY celY ADM96360.1 ADM96360.1 ADN00246.1 ADN00246.1 flgK flgK flgL flgL fliD fliD ADM96897.1 ADM96897.1 ganA ganA ADM97105.1 ADM97105.1 vgrGB vgrGB cel5Z cel5Z pelL pelL ADM99488.1 ADM99488.1 xynA xynA ADN00583.1 ADN00583.1 hrpA hrpA pelA pelA pelE pelE pelD pelD pemA pemA fliC fliC ADM96804.1 ADM96804.1 prt1 prt1 prtC prtC prtA prtA aguA aguA ADM97595.1 ADM97595.1 ADM97216.1 ADM97216.1 pnlH pnlH ADM98720.1 ADM98720.1 hrpN hrpN pehN pehN pelZ pelZ pelC pelC pelB pelB rhsC rhsC ADM97794.1 ADM97794.1 prtB prtB lpp lpp ydgD ydgD pelX pelX pehK pehK ADM98486.1 ADM98486.1 ADM98371.1 ADM98371.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (432 aa)
yjiRPutative regulator; Protein involved in transcription repressor activity, transcription factor activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity, transcription, regulation of transcription, DNA-dependent and biosynthetic process. (478 aa)
ADN00474.1Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (262 aa)
pehXExo-poly-alpha-D-galacturonosidase precursor; Protein involved in polygalacturonase activity, pectate lyase activity, polysaccharide catabolic process, carbohydrate catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host, carbohydrate metabolic process, pectin catabolic process and metabolism by symbiont of host cell wall pectin; Belongs to the glycosyl hydrolase 28 family. (602 aa)
pehWPolygalacturonase; Protein involved in polygalacturonase activity, carbohydrate catabolic process, polysaccharide catabolic process, metabolism by symbiont of host cell wall pectin, interaction with host via protein secreted by type II secretion system and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 28 family. (606 aa)
pehVExo-poly-alpha-D-galacturonosidase precursor; Protein involved in polygalacturonase activity, polysaccharide catabolic process, carbohydrate catabolic process, carbohydrate metabolic process and metabolism by symbiont of host cell wall pectin; Belongs to the glycosyl hydrolase 28 family. (606 aa)
mplUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily. (460 aa)
ADM97671.1Putative membrane protein. (345 aa)
ADM97669.1Putative membrane protein. (461 aa)
ADM97660.1VgrG protein. (678 aa)
ADM96955.1Xylosidase/arabinosidase; Protein involved in hydrolase activity, hydrolyzing O-glycosyl compounds, carbohydrate catabolic process and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 43 family. (534 aa)
ADM96651.1Transcriptional regulator, GntR family / AMINOTRANSFERASE CLASS-I; Protein involved in transcription factor activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity, transcription, regulation of transcription, DNA-dependent and biosynthetic process. (494 aa)
rhiERhamnogalacturonate lyase precursor; Degrades the rhamnogalacturonan I (RG-I) backbone of pectin. Is required for the full virulence of E.chrysanthemi strain 3937 as it is involved in rotting of plant tissue; Belongs to the polysaccharide lyase 4 family. (578 aa)
prtGSecreted protease C precursor; Protein involved in calcium ion binding, metallopeptidase activity, zinc ion binding, metalloendopeptidase activity, nitrogen compound metabolic process, amino acid catabolic process, modulation by symbiont of host protease activity, interaction with host via protein secreted by type II secretion system and proteolysis. (477 aa)
vgrGAPutative Rhs accessory genetic element; A Vgr protein that is probably part of a type VI secretion system (T6SS). May be required for export of proteins involved in Rhs- mediated cellular contact-dependent growth inhibition (CDI); Belongs to the VgrG protein family. (617 aa)
ydcRPredicted DNA-binding transcriptional regulator with an aminotransferase domain; Protein involved in catalytic activity, pyridoxal phosphate binding, transcription factor activity, transferase activity, transferring nitrogenous groups, regulation of transcription, DNA-dependent, transcription and biosynthetic process. (494 aa)
ADM97345.1Phosphate-binding protein of an ABC transporter; Protein involved in phosphorus metabolic process and transport. (347 aa)
yajIPutative outer membrane lipoprotein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (201 aa)
ADM96320.1GntR family transcriptional regulatory protein; Protein involved in transcription factor activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity, transcription, regulation of transcription, DNA-dependent and biosynthetic process. (446 aa)
celYEndoglucanase Y; Represents only 3% of the global cellulase activity; Belongs to the glycosyl hydrolase 8 (cellulase D) family. (332 aa)
ADM96360.1Probable valine-pyruvate aminotransferase; Protein involved in (DEPRECATED) molecular function unknown, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity, (DEPRECATED) biological process unknown and biosynthetic process. (398 aa)
ADN00246.1Protein involved in mannan endo-1,4-beta-mannosidase activity, catalytic activity, cation binding, polysaccharide catabolic process, substituted mannan metabolic process and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 26 family. (392 aa)
flgKFlagellar hook-associated protein flgK; Protein involved in structural molecule activity, motor activity, flagellum assembly, protein folding, taxis and ciliary or flagellar motility; Belongs to the flagella basal body rod proteins family. (640 aa)
flgLFlagellar hook-associated protein flgL; Protein involved in structural molecule activity, flagellum assembly, protein folding, taxis and ciliary or flagellar motility. (309 aa)
fliDFlagellar hook-associated protein fliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (484 aa)
ADM96897.1Phospholipase C 4 precursor; Most similar to plant phosphoesterase proteins; Protein involved in (DEPRECATED) molecular function unknown, hydrolase activity, acting on ester bonds and (DEPRECATED) biological process unknown. (475 aa)
ganAPeriplasmic 1,4-beta-endogalactanase; Protein involved in (DEPRECATED) molecular function unknown, glucosidase activity, catalytic activity, cation binding, (DEPRECATED) biological process unknown and carbohydrate metabolic process. (399 aa)
ADM97105.1Hypothetical protein; 8.1 extrachromosomal; prophage genes and phage related functions. (550 aa)
vgrGBPutative Rhs accessory genetic element; A Vgr protein that is probably part of a type VI secretion system (T6SS). May be required for export of proteins involved in Rhs- mediated cellular contact-dependent growth inhibition (CDI); Belongs to the VgrG protein family. (617 aa)
cel5ZEndo-1,4-beta-glucanase precursor; Represents 97% of the global cellulase activity. (426 aa)
pelLPectate lyase pelL; Presents an endo-cleaving activity on polygalacturonate or partially methylated pectin. Is effective in the maceration of plant tissue, and has an important role in soft-rot disease. Is 280-fold less active against polygalacturonate than the major pectate lyase PelB. When assayed on polygalacturonate, PelL releases oligogalacturonates of different sizes; upon prolonged incubation, PelL degrades the primary products to unsaturated tetramer and pentamer in addition to unsaturated dimer and trimer. When assayed on oligogalacturonates (degrees of polymerization of 2 to [...] (425 aa)
ADM99488.1Hydroxypyruvate isomerase; Belongs to the hyi family. (274 aa)
xynAXylanase; Protein involved in catalytic activity, cation binding, glucosylceramidase activity, endo-1,4-beta-xylanase activity, carbohydrate catabolic process, glucose metabolic process, polysaccharide catabolic process, metabolism by symbiont of substance in host, carbohydrate metabolic process, sphingolipid metabolic process and lysosome organization; Belongs to the glycosyl hydrolase 30 family. (413 aa)
ADN00583.1Cellulose 1,4-beta-cellobiosidase precursor; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (804 aa)
hrpAHrp pili protein hrpA; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in pellicle formation, interaction with host via protein secreted by type III secretion system and pathogenesis. (67 aa)
pelAPectate lyase, Pla; Involved in maceration and soft-rotting of plant tissue. (392 aa)
pelEPectate lyase pelE; Involved in maceration and soft-rotting of plant tissue. Pectate lyases have been implicated as pathogenicity factors which induce maceration or rotting of plant tissue. PelE is sufficient to induce these effects under laboratory conditions. (404 aa)
pelDPectate lyase D; PelE is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, carbohydrate catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. (392 aa)
pemAPectinesterase; Involved in maceration and soft-rotting of plant tissue. (366 aa)
fliCFlagellar filament structural protein (flagellin); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (280 aa)
ADM96804.1Pectate lyase; Homologous to type III helper protein HopPmaH. However, this protein has cysteines, while HopPmaH lacks cysteines - a characteristic of type III helper proteins. Therefore, this is not likely to be a type III helper; Protein involved in polysaccharide catabolic process, protein secretion by the type II secretion system, interaction with host via protein secreted by type II secretion system and metabolism by symbiont of host cell wall pectin. (315 aa)
prt1Extracellular metalloprotease precursor; Extracellular zinc metalloprotease. (349 aa)
prtCSecreted protease C precursor; Protein involved in calcium ion binding, metallopeptidase activity, zinc ion binding, metalloendopeptidase activity, peptidase activity, modulation by symbiont of host protease activity, interaction with host via protein secreted by type II secretion system, proteolysis and protein catabolic process. (479 aa)
prtASecreted protease A precursor; Protein involved in calcium ion binding, metallopeptidase activity, zinc ion binding, metalloendopeptidase activity, peptidase activity, modulation by symbiont of host protease activity, interaction with host via protein secreted by type II secretion system, proteolysis and protein catabolic process. (477 aa)
aguAAgmatine deiminase; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (367 aa)
ADM97595.1Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (416 aa)
ADM97216.1Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and (DEPRECATED) regulation of progression through cell cycle. (380 aa)
pnlHPectate lyase; Protein involved in carbohydrate catabolic process, polysaccharide catabolic process, protein secretion by the type II secretion system, interaction with host via protein secreted by type II secretion system and metabolism by symbiont of substance in host. (310 aa)
ADM98720.1Putative GntR-family regulatory protein and aminotransferase near polyamine transporter; Protein involved in transcription factor activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity, transcription, regulation of transcription, DNA-dependent and biosynthetic process. (495 aa)
hrpNHarpin hrpN; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in pellicle formation, pathogenesis and interaction with host via protein secreted by type III secretion system. (342 aa)
pehNExo-poly-alpha-D-galacturonosidase; Protein involved in polygalacturonase activity, carbohydrate catabolic process, polysaccharide catabolic process, metabolism by symbiont of host cell wall pectin and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 28 family. (467 aa)
pelZPectate lyase; PelZ is secreted by the Out secretion system; Protein involved in pectate lyase activity, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host, pectin catabolic process and pathogenesis. (425 aa)
pelCPectate lyase C; PelC is secretd by the Out secretion system; Protein involved in polysaccharide catabolic process, carbohydrate catabolic process and pathogenesis. (374 aa)
pelBPectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. (375 aa)
rhsCPutative membrane protein; Putative toxic component of a toxin-immunity protein module, which may function as a cellular contact-dependent growth inhibition (CDI) system. Expression of the C-terminus (residues 1519-1658) in E.coli inhibits growth but does not alter nucleoid structure. Its effect is blocked by cognate immunity protein RhsIC. Belongs to the RHS/WapA nuclease family. (1658 aa)
ADM97794.1Transcriptional regulator, GntR family; Protein involved in transcription factor activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity, transcription, regulation of transcription, DNA-dependent and biosynthetic process. (503 aa)
prtBSecreted protease B precursor; Protein involved in calcium ion binding, metallopeptidase activity, zinc ion binding, metalloendopeptidase activity, peptidase activity, modulation by symbiont of host protease activity, interaction with host via secreted substance, proteolysis and protein catabolic process. (481 aa)
lppMurein lipoprotein. (78 aa)
ydgDPredicted peptidase; Protein involved in serine-type endopeptidase activity, serine-type peptidase activity and proteolysis; Belongs to the peptidase S1B family. (272 aa)
pelXExopolygalacturonate lyase PelX; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pectin catabolic process. (734 aa)
pehKPolygalacturonase; Protein involved in polygalacturonase activity, catalytic activity, carbohydrate catabolic process, polysaccharide catabolic process, metabolism by symbiont of host cell wall pectin, interaction with host via protein secreted by type II secretion system and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 28 family. (459 aa)
ADM98486.1Protein involved in polysaccharide catabolic process. (234 aa)
ADM98371.1Endonuclease; Protein involved in (DEPRECATED) molecular function unknown, nucleic acid binding, endonuclease activity and (DEPRECATED) biological process unknown. (246 aa)
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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