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actP actP mtlA mtlA yghK yghK cbrA cbrA cbrB cbrB cbrC cbrC cbrD cbrD ybdA ybdA cbuC cbuC ybhF ybhF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
actPAcetate permease; Transports acetate; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (552 aa)
mtlAMannitol PTS system EIICBA or EIICB component; Protein involved in sugar:hydrogen symporter activity, transport and phosphoenolpyruvate-dependent sugar phosphotransferase system. (635 aa)
yghKL-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (516 aa)
cbrASiderophore staphylobactin ABC transporter, substrate-binding protein SirA; Binds citrate- or chloride-dependent Fe(3+); part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin; Belongs to the bacterial solute-binding protein 8 family. (305 aa)
cbrBFerric achromobactin inner membrane permease component; Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)
cbrCFerric achromobactin inner membrane permease component; Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
cbrDATP binding protein from the ferric achromobactin permease; Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for energy coupling to the transport system. (269 aa)
ybdAProtein involved in transporter activity, iron ion transport and transport. (426 aa)
cbuCFerrichrysobactin transporter, permease; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity and iron ion transport. (268 aa)
ybhFABC transporter multidrug efflux pump, fused ATP-binding domains; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, nucleotide binding, nucleoside-triphosphatase activity, ATP binding and ATPase activity. (583 aa)
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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