STRINGSTRING
tonB-2 tonB-2 ybdA ybdA cbuC cbuC fct fct fepA fepA ADM99823.1 ADM99823.1 ADM96930.1 ADM96930.1 tonB tonB ADM98713.1 ADM98713.1 ADN00065.1 ADN00065.1 ADM97122.1 ADM97122.1 ADM97461.1 ADM97461.1 cbrD cbrD cbrC cbrC cbrB cbrB cbrA cbrA acr acr sftP sftP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tonB-2Ferric siderophore transport system, periplasmic binding protein TonB; Protein involved in iron ion transmembrane transporter activity, protein transporter activity, iron ion transport and protein transport. (333 aa)
ybdAProtein involved in transporter activity, iron ion transport and transport. (426 aa)
cbuCFerrichrysobactin transporter, permease; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, ATP binding, ATPase activity, nucleotide binding, nucleoside-triphosphatase activity and iron ion transport. (268 aa)
fctFerrichrysobactin receptor; Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment; Belongs to the TonB-dependent receptor family. (735 aa)
fepAProtein involved in receptor activity, iron ion binding, siderophore-iron transmembrane transporter activity, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, transporter activity, iron ion transport, siderophore transport, proton transport and transport. (780 aa)
ADM99823.1Protein involved in receptor activity, transporter activity, iron ion binding, siderophore-iron transmembrane transporter activity, iron ion transport, transport and siderophore transport. (726 aa)
ADM96930.1Protein involved in receptor activity, iron ion binding, siderophore-iron transmembrane transporter activity, transporter activity, siderophore transport, (OBSOLETE) nutrient import and transport. (795 aa)
tonBTonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (252 aa)
ADM98713.1Ferrichrome-iron receptor. (119 aa)
ADN00065.1Iron utilization protein; Protein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (299 aa)
ADM97122.1Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (292 aa)
ADM97461.1Protein involved in receptor activity, transporter activity, iron ion binding, siderophore-iron transmembrane transporter activity, transport and siderophore transport. (722 aa)
cbrDATP binding protein from the ferric achromobactin permease; Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for energy coupling to the transport system. (269 aa)
cbrCFerric achromobactin inner membrane permease component; Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
cbrBFerric achromobactin inner membrane permease component; Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)
cbrASiderophore staphylobactin ABC transporter, substrate-binding protein SirA; Binds citrate- or chloride-dependent Fe(3+); part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin; Belongs to the bacterial solute-binding protein 8 family. (305 aa)
acrProtein involved in receptor activity, transporter activity, iron ion transport, transport, pathogenesis and achromobactin biosynthetic process. (704 aa)
sftPProtein involved in receptor activity, transporter activity and transport. (770 aa)
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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