Homoserine lactone synthase YpeI; Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to ExpR and thus acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.

Flagellar transcriptional activator flhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.

Homoserine lactone synthase YpeI; Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to ExpR and thus acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.

Homoserine lactone synthase YpeI; Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to ExpR and thus acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.

Two-component system, NarL family, invasion response regulator UvrY; This protein belongs to the LuxR family of transcriptional regulators; This protein is phosphorylated by the sensor-histidine kinase BarA; The BarA sensor could monitor some metabolic product that is representative of the prevalent energy status in the medium; Protein involved in transcription activator activity, two-component response regulator activity, transcription factor activity, sequence-specific DNA binding, transcription, regulation of transcription, DNA-dependent, biofilm formation and pathogenesis.

Flagellar transcriptional activator flhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.

Homoserine lactone synthase YpeI; Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to ExpR and thus acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.

2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.

Pectin degradation protein kdgF; May have a role in pathogenicity.

2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.

2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.

2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.

YebK belongs to the RpiR family of transcriptional regulator; Protein involved in transcription repressor activity, transcription factor activity, sugar binding, regulation of transcription, DNA-dependent and carbohydrate metabolic process.

2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.

Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.

Pectin degradation protein kdgF; May have a role in pathogenicity.

2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.

Pectin degradation protein kdgF; May have a role in pathogenicity.

Oligogalacturonate lyase; Involved in degradation of pectin, which causes soft-rod disease in plants.

Pectin degradation protein kdgF; May have a role in pathogenicity.

Exo-poly-alpha-D-galacturonosidase; Protein involved in polygalacturonase activity, carbohydrate catabolic process, polysaccharide catabolic process, metabolism by symbiont of host cell wall pectin and carbohydrate metabolic process; Belongs to the glycosyl hydrolase 28 family.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.

Homoserine lactone synthase YpeI; Required for the synthesis of OHHL (N-(3-oxohexanoyl)-L- homoserine lactone), an autoinducer molecule which binds to ExpR and thus acts in virulence (soft rot disease) through the activation of genes for plant tissue macerating enzymes.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.

Oligogalacturonate lyase; Involved in degradation of pectin, which causes soft-rod disease in plants.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.

Pectate lyase pelE; Involved in maceration and soft-rotting of plant tissue. Pectate lyases have been implicated as pathogenicity factors which induce maceration or rotting of plant tissue. PelE is sufficient to induce these effects under laboratory conditions.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.

Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.

Two-component system, NarL family, invasion response regulator UvrY; This protein belongs to the LuxR family of transcriptional regulators; This protein is phosphorylated by the sensor-histidine kinase BarA; The BarA sensor could monitor some metabolic product that is representative of the prevalent energy status in the medium; Protein involved in transcription activator activity, two-component response regulator activity, transcription factor activity, sequence-specific DNA binding, transcription, regulation of transcription, DNA-dependent, biofilm formation and pathogenesis.

2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.

2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family.

2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.

Oligogalacturonate lyase; Involved in degradation of pectin, which causes soft-rod disease in plants.

Oligogalacturonate lyase; Involved in degradation of pectin, which causes soft-rod disease in plants.

Pectin degradation protein kdgF; May have a role in pathogenicity.

Oligogalacturonate lyase; Involved in degradation of pectin, which causes soft-rod disease in plants.

DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis.