STRINGSTRING
garR garR gudP gudP gudX gudX gudD gudD garL garL garK garK fbp fbp hrpQ hrpQ mtgA mtgA vfmB vfmB pstB pstB pstA pstA pitA pitA yeiQ yeiQ polB polB pstB-2 pstB-2 pstA-2 pstA-2 dnaE dnaE bcsA bcsA celY celY dctA dctA kdgK kdgK pgi pgi fliN fliN uxuA uxuA exuT exuT uxaB uxaB uxaA uxaA acr acr pelE pelE pelD pelD fliC fliC kdgA kdgA zwf zwf kduI kduI tpiA tpiA pta pta ackA ackA gnd gnd kduD kduD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
garRTartronate semialdehyde reductase (TSAR); Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily. (294 aa)
gudPPredicted D-glucarate transporter; Protein involved in transporter activity, carbohydrate catabolic process and transport. (450 aa)
gudXD-glucarate dehydratase-related protein; Protein involved in (DEPRECATED) molecular function unknown, catalytic activity, (DEPRECATED) biological process unknown and metabolic process. (453 aa)
gudDD-glucarate dehydratase; Protein involved in catalytic activity, carbohydrate catabolic process and metabolic process. (446 aa)
garLalpha-dehydro-beta-deoxy-D-glucarate aldolase; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily. (256 aa)
garKProtein involved in glycerate kinase activity, carbohydrate catabolic process and organic acid phosphorylation; Belongs to the glycerate kinase type-1 family. (380 aa)
fbpProtein involved in phosphoric ester hydrolase activity, glycolysis, gluconeogenesis and carbohydrate metabolic process. (334 aa)
hrpQHrpQ; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response; Protein involved in protein secretion by the type III secretion system, interaction with host via protein secreted by type III secretion system and pathogenesis. (323 aa)
mtgABiosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (249 aa)
vfmBProtein involved in (DEPRECATED) molecular function unknown and (DEPRECATED) biological process unknown. (203 aa)
pstBPhosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (258 aa)
pstAPhosphate transporter subunit; Protein involved in (OBSOLETE) ATP-binding cassette (ABC) transporter activity, transporter activity, inorganic phosphate transmembrane transporter activity, phosphate transmembrane transporter activity, phosphorus metabolic process, transport and phosphate transport. (295 aa)
pitAProtein involved in inorganic phosphate transmembrane transporter activity, phosphopantetheine binding, phosphorus metabolic process and phosphate transport. (502 aa)
yeiQProtein involved in oxidoreductase activity, coenzyme binding, catalytic activity, carbohydrate catabolic process and metabolic process; Belongs to the mannitol dehydrogenase family. (498 aa)
polBDNA polymerase II; Protein involved in nucleotide binding, nucleic acid binding, DNA-directed DNA polymerase activity, DNA binding, response to radiation, DNA-dependent DNA replication, DNA repair, SOS response, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process and DNA replication. (790 aa)
pstB-2Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (272 aa)
pstA-2Phosphate ABC transporter, permease component; Protein involved in transporter activity, inorganic phosphate transmembrane transporter activity, phosphate transmembrane transporter activity, transport and phosphate transport. (548 aa)
dnaEDNA polymerase III alpha subunit; Protein involved in DNA binding, DNA-directed DNA polymerase activity, (DEPRECATED) alpha DNA polymerase activity, 3'-5' exonuclease activity, nucleic acid binding, DNA-dependent DNA replication and DNA replication. (1160 aa)
bcsACellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. (696 aa)
celYEndoglucanase Y; Represents only 3% of the global cellulase activity; Belongs to the glycosyl hydrolase 8 (cellulase D) family. (332 aa)
dctAC4-dicarboxylic acid, orotate and citrate transporter; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (428 aa)
kdgK2-dehydro-3-deoxygluconate kinase; Catalyzes the phosphorylation of 2-keto-3-deoxygluconate (KDG) to produce 2-keto-3-deoxy-6-phosphogluconate (KDPG). Belongs to the carbohydrate kinase PfkB family. (310 aa)
pgiProtein involved in glucose-6-phosphate isomerase activity, glycolysis and gluconeogenesis; Belongs to the GPI family. (549 aa)
fliNFlagellar motor switch protein fliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (138 aa)
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (394 aa)
exuTHexuronate transport system; Protein involved in transporter activity, carbohydrate catabolic process and transport. (432 aa)
uxaBProtein involved in oxidoreductase activity, coenzyme binding and carbohydrate catabolic process; Belongs to the mannitol dehydrogenase family. UxaB subfamily. (483 aa)
uxaAAltronate hydrolase; Protein involved in hydro-lyase activity and carbohydrate catabolic process. (496 aa)
acrProtein involved in receptor activity, transporter activity, iron ion transport, transport, pathogenesis and achromobactin biosynthetic process. (704 aa)
pelEPectate lyase pelE; Involved in maceration and soft-rotting of plant tissue. Pectate lyases have been implicated as pathogenicity factors which induce maceration or rotting of plant tissue. PelE is sufficient to induce these effects under laboratory conditions. (404 aa)
pelDPectate lyase D; PelE is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, carbohydrate catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. (392 aa)
fliCFlagellar filament structural protein (flagellin); Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (280 aa)
kdgA2-dehydro-3-deoxyphosphogluconate aldolase; Protein involved in catalytic activity, carbohydrate catabolic process, Entner-Doudoroff pathway, glyoxylate catabolic process and metabolic process; Belongs to the KHG/KDPG aldolase family. (213 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (491 aa)
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (278 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (256 aa)
ptaPhosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (713 aa)
ackAAcetate kinase A and propionate kinase 2; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
gndGluconate-6-phosphate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (468 aa)
kduD2-deoxy-D-gluconate 3-dehydrogenase; Catalyzes the reduction of 2,5-diketo-3-deoxygluconate (DKII or 4,6-dihydroxy-2,5-dioxohexanoate) into 2-keto-3-deoxygluconate (KDG or 2-dehydro-3-deoxygluconate) with a concomitant oxidation of NADH. (253 aa)
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.