node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
crp | kdgR | Dda3937_00546 | Dda3937_03685 | Cyclic AMP receptor protein; Protein involved in transcription activator activity, transcription repressor activity, transcription factor activity, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription. | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | 0.597 |
crp | pecS | Dda3937_00546 | Dda3937_00976 | Cyclic AMP receptor protein; Protein involved in transcription activator activity, transcription repressor activity, transcription factor activity, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription. | DNA-binding transcriptional regulatory protein PecS; Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM. | 0.547 |
crp | pecT | Dda3937_00546 | Dda3937_00364 | Cyclic AMP receptor protein; Protein involved in transcription activator activity, transcription repressor activity, transcription factor activity, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription. | Probable HTH-type transcriptional regulator lrhA; Regulates pectinase gene expression. | 0.475 |
kdgR | crp | Dda3937_03685 | Dda3937_00546 | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | Cyclic AMP receptor protein; Protein involved in transcription activator activity, transcription repressor activity, transcription factor activity, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription. | 0.597 |
kdgR | pecS | Dda3937_03685 | Dda3937_00976 | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | DNA-binding transcriptional regulatory protein PecS; Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM. | 0.622 |
kdgR | pecT | Dda3937_03685 | Dda3937_00364 | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | Probable HTH-type transcriptional regulator lrhA; Regulates pectinase gene expression. | 0.582 |
kdgR | pelD | Dda3937_03685 | Dda3937_03372 | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | Pectate lyase D; PelE is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, carbohydrate catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | 0.426 |
kdgR | pelE | Dda3937_03685 | Dda3937_03371 | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | Pectate lyase pelE; Involved in maceration and soft-rotting of plant tissue. Pectate lyases have been implicated as pathogenicity factors which induce maceration or rotting of plant tissue. PelE is sufficient to induce these effects under laboratory conditions. | 0.463 |
pecS | crp | Dda3937_00976 | Dda3937_00546 | DNA-binding transcriptional regulatory protein PecS; Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM. | Cyclic AMP receptor protein; Protein involved in transcription activator activity, transcription repressor activity, transcription factor activity, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription. | 0.547 |
pecS | kdgR | Dda3937_00976 | Dda3937_03685 | DNA-binding transcriptional regulatory protein PecS; Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM. | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | 0.622 |
pecS | pecT | Dda3937_00976 | Dda3937_00364 | DNA-binding transcriptional regulatory protein PecS; Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM. | Probable HTH-type transcriptional regulator lrhA; Regulates pectinase gene expression. | 0.629 |
pecT | crp | Dda3937_00364 | Dda3937_00546 | Probable HTH-type transcriptional regulator lrhA; Regulates pectinase gene expression. | Cyclic AMP receptor protein; Protein involved in transcription activator activity, transcription repressor activity, transcription factor activity, DNA binding, transcription, regulation of transcription, DNA-dependent and regulation of transcription. | 0.475 |
pecT | kdgR | Dda3937_00364 | Dda3937_03685 | Probable HTH-type transcriptional regulator lrhA; Regulates pectinase gene expression. | DNA-binding transcriptional regulatory protein KdgR; KdgR interacts with 2-keto-3-deoxygluconate which is an inducer; The consensus KdgR-binding site is ATRAAAYRNYRTTTYAT; KdgR belongs to the IclR family of transcriptional regulator; Protein involved in DNA binding, transcription repressor activity, metabolism by symbiont of host cell wall pectin, regulation of transcription, DNA-dependent, negative regulation of transcription and pathogenesis. | 0.582 |
pecT | pecS | Dda3937_00364 | Dda3937_00976 | Probable HTH-type transcriptional regulator lrhA; Regulates pectinase gene expression. | DNA-binding transcriptional regulatory protein PecS; Negative regulator of pectinase, cellulase, blue pigment production and virulence genes. Also binds to promoter sites in the pecS-pecM intergenic region and negatively autoregulate its expression as well as that of pecM. | 0.629 |
pelB | pelC | Dda3937_04193 | Dda3937_04192 | Pectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | Pectate lyase C; PelC is secretd by the Out secretion system; Protein involved in polysaccharide catabolic process, carbohydrate catabolic process and pathogenesis. | 0.901 |
pelB | pelD | Dda3937_04193 | Dda3937_03372 | Pectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | Pectate lyase D; PelE is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, carbohydrate catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | 0.944 |
pelB | pelE | Dda3937_04193 | Dda3937_03371 | Pectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | Pectate lyase pelE; Involved in maceration and soft-rotting of plant tissue. Pectate lyases have been implicated as pathogenicity factors which induce maceration or rotting of plant tissue. PelE is sufficient to induce these effects under laboratory conditions. | 0.945 |
pelB | pelL | Dda3937_04193 | Dda3937_02794 | Pectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | Pectate lyase pelL; Presents an endo-cleaving activity on polygalacturonate or partially methylated pectin. Is effective in the maceration of plant tissue, and has an important role in soft-rot disease. Is 280-fold less active against polygalacturonate than the major pectate lyase PelB. When assayed on polygalacturonate, PelL releases oligogalacturonates of different sizes; upon prolonged incubation, PelL degrades the primary products to unsaturated tetramer and pentamer in addition to unsaturated dimer and trimer. When assayed on oligogalacturonates (degrees of polymerization of 2 to [...] | 0.901 |
pelB | pelZ | Dda3937_04193 | Dda3937_04191 | Pectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | Pectate lyase; PelZ is secreted by the Out secretion system; Protein involved in pectate lyase activity, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host, pectin catabolic process and pathogenesis. | 0.844 |
pelC | pelB | Dda3937_04192 | Dda3937_04193 | Pectate lyase C; PelC is secretd by the Out secretion system; Protein involved in polysaccharide catabolic process, carbohydrate catabolic process and pathogenesis. | Pectate lyase B; PelB is secreted by the Out secretion system; Protein involved in pectate lyase activity, polysaccharide catabolic process, interaction with host via protein secreted by type II secretion system, metabolism by symbiont of substance in host and pathogenesis. | 0.901 |