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ydiI ydiI ubiX ubiX ADN00717.1 ADN00717.1 menC-2 menC-2 ytfG ytfG ubiG ubiG menF menF menD menD yfbB yfbB menB menB menC menC menE menE ubiE ubiE ADM99359.1 ADM99359.1 cbsC cbsC ubiF ubiF ubiH ubiH visC visC ubiC ubiC ubiA ubiA ADM97993.1 ADM97993.1 menA menA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
ydiIEsterase; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA). (140 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (189 aa)
ADN00717.1Protein involved in 4-hydroxyphenylpyruvate dioxygenase activity, amino acid catabolic process and aromatic amino acid family metabolic process. (388 aa)
menC-2O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (370 aa)
ytfGNAD(P)H:quinone oxidoreductase; Protein involved in (DEPRECATED) molecular function unknown, (DEPRECATED) biological process unknown and potassium ion transport. (285 aa)
ubiGBifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (264 aa)
menFIsochorismate synthase 2; Catalyzes the conversion of chorismate to isochorismate. (443 aa)
menD2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. (558 aa)
yfbBPredicted peptidase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). (266 aa)
menBDihydroxynaphthoic acid synthetase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). (285 aa)
menCo-succinylbenzoyl-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (322 aa)
menEo-succinylbenzoate-CoA ligase; Protein involved in catalytic activity, o-succinylbenzoate-CoA ligase activity, anaerobic respiration, metabolic process and menaquinone biosynthetic process. (459 aa)
ubiEUbiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (251 aa)
ADM99359.1Protein involved in (DEPRECATED) molecular function unknown, catalytic activity and (DEPRECATED) biological process unknown. (138 aa)
cbsCIsochorismate hydroxymutase 2, chrysobactin biosynthesis; Protein involved in isochorismate synthase activity, iron ion transport, chrysobactin biosynthetic process, biosynthetic process and pathogenesis. (395 aa)
ubiF2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase; Protein involved in oxidoreductase activity, (OBSOLETE) ubiquinone biosynthetic process monooxygenase activity, FAD binding, (OBSOLETE) electron transport, metabolic process and ubiquinone biosynthetic process. (388 aa)
ubiH2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding protein; Protein involved in (OBSOLETE) ubiquinone biosynthetic process monooxygenase activity, FAD binding, monooxygenase activity, oxidoreductase activity, aerobic respiration, ubiquinone biosynthetic process, (OBSOLETE) electron transport, cellular aromatic compound metabolic process and metabolic process. (392 aa)
visCPredicted oxidoreductase with FAD/NAD(P)-binding domain; Protein involved in (DEPRECATED) molecular function unknown, (OBSOLETE) ubiquinone biosynthetic process monooxygenase activity, FAD binding, oxidoreductase activity, (DEPRECATED) biological process unknown, ubiquinone biosynthetic process, (OBSOLETE) electron transport and metabolic process. (403 aa)
ubiCChorismate pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway. (171 aa)
ubiAP-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (287 aa)
ADM97993.1Multimeric flavodoxin WrbA; Protein involved in FMN binding, oxidoreductase activity, tryptophan biosynthetic process and (OBSOLETE) electron transport. (184 aa)
menA1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. (302 aa)
Your Current Organism:
Dickeya dadantii
NCBI taxonomy Id: 198628
Other names: D. dadantii 3937, Dickeya dadantii 3937, Dickeya dadantii str. 3937, Dickeya dadantii strain 3937, Erwinia chrysanthemi str. 3937, Pectobacterium chrysanthemi str. 3937
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