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htrA htrA phoE phoE tsx tsx ompX ompX ompF ompF ompA ompA ompW ompW slyB slyB ompC ompC btuB btuB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
htrAProtease do precursor; Escherichia coli K-12 ortholog: b0161; Escherichia coli O157:H7 ortholog: z0173; Belongs to the peptidase S1C family. (474 aa)
phoEOuter membrane pore protein E precursor; Escherichia coli K-12 ortholog: b0241; Escherichia coli O157:H7 ortholog: z0302; Belongs to the Gram-negative porin family. (353 aa)
tsxNucleoside-specific channel-forming protein tsx precursor; Escherichia coli K-12 ortholog: b0411; Escherichia coli O157:H7 ortholog: z0512. (310 aa)
ompXOuter membrane protein X precursor; Escherichia coli K-12 ortholog: b0814; Escherichia coli O157:H7 ortholog: z1036. (173 aa)
ompFOuter membrane protein F precursor; Porin ompF; Escherichia coli K-12 ortholog: b0929; Escherichia coli O157:H7 ortholog: z1276; Belongs to the Gram-negative porin family. (362 aa)
ompAOuter membrane protein II*; Escherichia coli K-12 ortholog: b0957; Escherichia coli O157:H7 ortholog: z1307; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (379 aa)
ompWOuter membrane protein W precursor; Escherichia coli K-12 ortholog: b1256; Escherichia coli O157:H7 ortholog: z2034. (238 aa)
slyBOuter membrane lipoprotein slyB precursor; Escherichia coli K-12 ortholog: b1641; Escherichia coli O157:H7 ortholog: z2655. (155 aa)
ompCOuter membrane protein C precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane, including some antibiotics. Variation of the residues in the constriction zone modifies the transverse electric field in the zone, altering antibiotic resistance. Belongs to the Gram-negative porin family. (375 aa)
btuBVitamin B12 receptor precursor; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily. (629 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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