STRINGSTRING
ychM ychM yfbS yfbS yfbU yfbU yfbV yfbV c2837 c2837
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ychMPutative sulfate transporter ychM; Escherichia coli K-12 ortholog: b1206; Escherichia coli O157:H7 ortholog: z1977. (559 aa)
yfbSHypothetical protein yfbS; Escherichia coli K-12 ortholog: b2292; Escherichia coli O157:H7 ortholog: z3553. (610 aa)
yfbUProtein yfbU; Escherichia coli K-12 ortholog: b2294; Escherichia coli O157:H7 ortholog: z3555; Belongs to the UPF0304 family. (191 aa)
yfbVHypothetical protein yfbV; Escherichia coli K-12 ortholog: b2295; Escherichia coli O157:H7 ortholog: z3556. (151 aa)
c2837Hypothetical protein. (43 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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