STRINGSTRING
ybiJ ybiJ ygiD ygiD yqjF yqjF yhaJ yhaJ yhaK yhaK yhhW yhhW
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybiJHypothetical protein ybiJ precursor; Escherichia coli K-12 ortholog: b0802; Escherichia coli O157:H7 ortholog: z1023. (86 aa)
ygiDHypothetical protein ygiD; Escherichia coli K-12 ortholog: b3039; Escherichia coli O157:H7 ortholog: z4396. (271 aa)
yqjFHypothetical protein yqjF; Escherichia coli K-12 ortholog: b3101; Escherichia coli O157:H7 ortholog: z4455. (134 aa)
yhaJHypothetical transcriptional regulator yhaJ; Escherichia coli K-12 ortholog: b3105; Escherichia coli O157:H7 ortholog: z4459; Belongs to the LysR transcriptional regulatory family. (298 aa)
yhaKHypothetical protein yhaK; Escherichia coli K-12 ortholog: b3106; Escherichia coli O157:H7 ortholog: z4460; Belongs to the pirin family. (233 aa)
yhhWProtein yhhW; Escherichia coli K-12 ortholog: b3439; Escherichia coli O157:H7 ortholog: z4807; Belongs to the pirin family. (231 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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