STRINGSTRING
ybjE ybjE c1008 c1008 c3545 c3545 yggL yggL c5312 c5312
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybjEHypothetical protein ybjE; Escherichia coli K-12 ortholog: b0874; Escherichia coli O157:H7 ortholog: z1108. (299 aa)
c1008Hypothetical protein. (44 aa)
c3545Hypothetical protein. (46 aa)
yggLHypothetical protein yggL; Escherichia coli K-12 ortholog: b2959; Escherichia coli O157:H7 ortholog: z4304. (118 aa)
c5312Putative conserved protein; Residues 1 to 78 of 78 are 97.43 pct identical to residues 570 to 647 of 647 from MG1655 : b4213. (78 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.