STRINGSTRING
ybaV ybaV ycaI ycaI c1282 c1282 c3671 c3671 yraL yraL yraN yraN yraO yraO yraP yraP smf smf yhgH yhgH yifB yifB c4688 c4688
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybaVHypothetical protein ybaV precursor; Escherichia coli K-12 ortholog: b0442; Escherichia coli O157:H7 ortholog: z0549. (123 aa)
ycaIHypothetical protein ycaI; Escherichia coli K-12 ortholog: b0913; Escherichia coli O157:H7 ortholog: z1259. (764 aa)
c1282Putative radC-like protein yeeS; Escherichia coli K-12 ortholog: b2002; Escherichia coli O157:H7 ortholog: z1217; Belongs to the UPF0758 family. (158 aa)
c3671Putative radC-like protein yeeS; Escherichia coli K-12 ortholog: b2002; Escherichia coli O157:H7 ortholog: z1217; Belongs to the UPF0758 family. (163 aa)
yraLHypothetical protein yraL; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (287 aa)
yraNHypothetical protein yraN; Escherichia coli K-12 ortholog: b3148; Escherichia coli O157:H7 ortholog: z4507; Belongs to the UPF0102 family. (131 aa)
yraOHypothetical protein yraO; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. (196 aa)
yraPHypothetical protein yraP precursor; Escherichia coli K-12 ortholog: b3150; Escherichia coli O157:H7 ortholog: z4509. (191 aa)
smfUnknown protein fragment 1; Escherichia coli K-12 ortholog: b3286; Escherichia coli O157:H7 ortholog: z4656. (374 aa)
yhgHHypothetical protein yhgH; Could be involved in gluconate metabolism. (248 aa)
yifBHypothetical protein yifB; ORF III; Escherichia coli K-12 ortholog: b3765; Escherichia coli O157:H7 ortholog: z5277; bifunctional. (361 aa)
c4688Hypothetical protein; Residues 1 to 95 of 109 are 100.00 pct identical to residues 1 to 95 of 516 from GenPept.129 : >gb|AAG58961.1|AE005608_2 (AE005608) putative 2-component regulator [Escherichia coli O157:H7 EDL933]. (109 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.