STRINGSTRING
yggR yggR yggS yggS yggT yggT yggU yggU yggW yggW
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yggRHypothetical protein yggR; Escherichia coli K-12 ortholog: b2950; Escherichia coli O157:H7 ortholog: z4295. (351 aa)
yggSHypothetical protein yggS; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (234 aa)
yggTHypothetical protein yggT; Escherichia coli K-12 ortholog: b2952; Escherichia coli O157:H7 ortholog: z4297. (188 aa)
yggUHypothetical protein yggU; Escherichia coli K-12 ortholog: b2953; Escherichia coli O157:H7 ortholog: z4298; Belongs to the UPF0235 family. (100 aa)
yggWHypothetical protein yggW; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (378 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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