STRINGSTRING
galP galP sprT sprT endA endA yggJ yggJ yqgE yqgE yqgF yqgF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
galPGalactose-proton symporter; Uptake of galactose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (468 aa)
sprTProtein sprT; Escherichia coli K-12 ortholog: b2944; Escherichia coli O157:H7 ortholog: z4289; Belongs to the SprT family. (183 aa)
endAEndonuclease I precursor; Escherichia coli K-12 ortholog: b2945; Escherichia coli O157:H7 ortholog: z4290. (236 aa)
yggJHypothetical protein yggJ; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity); Belongs to the RNA methyltransferase RsmE family. (252 aa)
yqgEProtein yqgE; Escherichia coli K-12 ortholog: b2948; Escherichia coli O157:H7 ortholog: z4293; Belongs to the UPF0301 (AlgH) family. (211 aa)
yqgFHypothetical protein yqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (138 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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