STRINGSTRING
ybcH ybcH nfrA nfrA nfrB nfrB c1257 c1257 c1273 c1273 c1274 c1274 ycfX ycfX ybcU ybcU c1704 c1704 yciQ yciQ pqqL pqqL yddB yddB yddA yddA yegI yegI yegK yegK yegL yegL yehI yehI yfaL yfaL c3655 c3655 c3664 c3664 yghD yghD c3702 c3702 c3703 c3703 yhbX yhbX pinO pinO yheD yheD yheE yheE yheF yheF yheG yheG hofF hofF hofG hofG hofH hofH yheH yheH yheI yheI yheJ yheJ yheK yheK pshM pshM hofD hofD yheB yheB yhhZ yhhZ yrhA yrhA yihF yihF yihL yihL yihM yihM yihN yihN yjjJ yjjJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybcHHypothetical protein ybcH precursor; Escherichia coli K-12 ortholog: b0567; Escherichia coli O157:H7 ortholog: z0697. (296 aa)
nfrABacteriophage N4 adsorption protein A precursor; Escherichia coli K-12 ortholog: b0568; Escherichia coli O157:H7 ortholog: z0698. (997 aa)
nfrBBacteriophage N4 adsorption protein B; Escherichia coli K-12 ortholog: b0569; Escherichia coli O157:H7 ortholog: z0699. (720 aa)
c1257Putative conserved protein; Residues 8 to 120 of 120 are 98.23 pct identical to residues 316 to 428 of 442 from MG1655 : b4278. (120 aa)
c1273Antigen 43 precursor; AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651. (1091 aa)
c1274Hypothetical protein yeeR; Escherichia coli K-12 ortholog: b2001. (840 aa)
ycfXHypothetical protein ycfX; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P. (303 aa)
ybcUBor protein homolog from lambdoid prophage DLP12 precursor; Escherichia coli K-12 ortholog: b0557; Escherichia coli O157:H7 ortholog: z1878. (113 aa)
c1704Transposase insG for insertion sequence element IS4; Escherichia coli K-12 ortholog: b4278. (401 aa)
yciQHypothetical protein yciQ; Escherichia coli K-12 ortholog: b1268. (630 aa)
pqqLProbable zinc protease pqqL; Escherichia coli K-12 ortholog: b1494; Escherichia coli O157:H7 ortholog: z2214; Belongs to the peptidase M16 family. (931 aa)
yddBHypothetical protein yddB; CDS103; Escherichia coli K-12 ortholog: b1495; Escherichia coli O157:H7 ortholog: z2213. (790 aa)
yddAHypothetical ABC transporter ATP-binding protein yddA; CDS102; Escherichia coli K-12 ortholog: b1496; Escherichia coli O157:H7 ortholog: z2212. (561 aa)
yegIHypothetical protein yegI; Escherichia coli K-12 ortholog: b2070; Escherichia coli O157:H7 ortholog: z3239. (649 aa)
yegKHypothetical protein yegK; Escherichia coli K-12 ortholog: b2072; Escherichia coli O157:H7 ortholog: z3240. (253 aa)
yegLHypothetical protein yegL; Escherichia coli K-12 ortholog: b2073; Escherichia coli O157:H7 ortholog: z3241. (219 aa)
yehIHypothetical protein yehI; Escherichia coli K-12 ortholog: b2118; Escherichia coli O157:H7 ortholog: z3287. (1210 aa)
yfaLHypothetical protein yfaL precursor; Escherichia coli K-12 ortholog: b2233; Escherichia coli O157:H7 ortholog: z3487. (1254 aa)
c3655Antigen 43 precursor; AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651. (1042 aa)
c3664Hypothetical protein yeeR; Escherichia coli K-12 ortholog: b2001. (840 aa)
yghDPutative general secretion pathway protein M-type yghD; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (178 aa)
c3702Hypothetical protein; Residues 1 to 137 of 137 are 98.54 pct identical to residues 189 to 325 of 325 from GenPept.129 : >gb|AAL60191.1|AF426313_11 (AF426313) hypothetical type II secretion protein GspK [Escherichia coli]. (137 aa)
c3703Transposase insG for insertion sequence element IS4; Escherichia coli K-12 ortholog: b4278. (449 aa)
yhbXOuter-membrane protein yhbX precursor; Escherichia coli K-12 ortholog: b3173; Escherichia coli O157:H7 ortholog: z4535. (552 aa)
pinOPinO protein; Escherichia coli K-12 ortholog: b3322. (140 aa)
yheDProbable general secretion pathway protein A; Escherichia coli K-12 ortholog: b3323. (489 aa)
yheEProbable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324. (271 aa)
yheFProbable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325. (654 aa)
yheGProbable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (493 aa)
hofFPutative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327. (398 aa)
hofGPutative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328. (145 aa)
hofHPutative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329. (169 aa)
yheHProbable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741. (138 aa)
yheIProbable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331. (195 aa)
yheJProbable general secretion pathway protein K; Escherichia coli K-12 ortholog: b3332. (301 aa)
yheKProbable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633. (388 aa)
pshMPutative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334. (161 aa)
hofDType 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family. (225 aa)
yheBProbable bifunctional chitinase/lysozyme precursor; Escherichia coli K-12 ortholog: b3338bifunctional; Chitinase; Lysozyme. (900 aa)
yhhZHypothetical protein yhhZ; Escherichia coli K-12 ortholog: b3442. (392 aa)
yrhAHypothetical protein yrhA; Escherichia coli K-12 ortholog: b3443. (164 aa)
yihFHypothetical protein yihF; Escherichia coli K-12 ortholog: b3861; Escherichia coli O157:H7 ortholog: z5393. (490 aa)
yihLHypothetical transcriptional regulator yihL; Escherichia coli K-12 ortholog: b3872; Escherichia coli O157:H7 ortholog: z5408. (236 aa)
yihMHypothetical protein yihM; Escherichia coli K-12 ortholog: b3873; Escherichia coli O157:H7 ortholog: z5409. (326 aa)
yihNHypothetical protein yihN; Escherichia coli K-12 ortholog: b3874; Escherichia coli O157:H7 ortholog: z5410. (421 aa)
yjjJHypothetical protein yjjJ; Escherichia coli K-12 ortholog: b4385. (443 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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