STRINGSTRING
c1273 c1273 c1274 c1274 yciQ yciQ pqqL pqqL yddB yddB yddA yddA yehI yehI c3655 c3655 c3664 c3664 yihF yihF yjjJ yjjJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
c1273Antigen 43 precursor; AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651. (1091 aa)
c1274Hypothetical protein yeeR; Escherichia coli K-12 ortholog: b2001. (840 aa)
yciQHypothetical protein yciQ; Escherichia coli K-12 ortholog: b1268. (630 aa)
pqqLProbable zinc protease pqqL; Escherichia coli K-12 ortholog: b1494; Escherichia coli O157:H7 ortholog: z2214; Belongs to the peptidase M16 family. (931 aa)
yddBHypothetical protein yddB; CDS103; Escherichia coli K-12 ortholog: b1495; Escherichia coli O157:H7 ortholog: z2213. (790 aa)
yddAHypothetical ABC transporter ATP-binding protein yddA; CDS102; Escherichia coli K-12 ortholog: b1496; Escherichia coli O157:H7 ortholog: z2212. (561 aa)
yehIHypothetical protein yehI; Escherichia coli K-12 ortholog: b2118; Escherichia coli O157:H7 ortholog: z3287. (1210 aa)
c3655Antigen 43 precursor; AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651. (1042 aa)
c3664Hypothetical protein yeeR; Escherichia coli K-12 ortholog: b2001. (840 aa)
yihFHypothetical protein yihF; Escherichia coli K-12 ortholog: b3861; Escherichia coli O157:H7 ortholog: z5393. (490 aa)
yjjJHypothetical protein yjjJ; Escherichia coli K-12 ortholog: b4385. (443 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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