12 items (Escherichia coli CFT073) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	yheE	Probable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324. (271 aa)
	yheF	Probable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325. (654 aa)
	yheG	Probable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (493 aa)
	hofF	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327. (398 aa)
	hofG	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328. (145 aa)
	hofH	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329. (169 aa)
	yheH	Probable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741. (138 aa)
	yheI	Probable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331. (195 aa)
	yheJ	Probable general secretion pathway protein K; Escherichia coli K-12 ortholog: b3332. (301 aa)
	yheK	Probable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633. (388 aa)
	pshM	Putative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334. (161 aa)
	hofD	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family. (225 aa)

Your Current Organism:

Escherichia coli CFT073

NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hofD	hofF	c4106	c4098	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	0.950
hofD	hofG	c4106	c4099	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	0.962
hofD	hofH	c4106	c4100	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329.	0.834
hofD	pshM	c4106	c4105	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Putative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334.	0.869
hofD	yheE	c4106	c4095	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324.	0.906
hofD	yheF	c4106	c4096	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325.	0.867
hofD	yheG	c4106	c4097	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.966
hofD	yheH	c4106	c4101	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741.	0.841
hofD	yheI	c4106	c4102	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331.	0.810
hofD	yheJ	c4106	c4103	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein K; Escherichia coli K-12 ortholog: b3332.	0.859
hofD	yheK	c4106	c4104	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	Probable general secretion pathway protein L; Escherichia coli K-12 ortholog: b3333; Escherichia coli O157:H7 ortholog: z2633.	0.943
hofF	hofD	c4098	c4106	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Type 4 prepilin-like proteins leader peptide processing enzyme; Escherichia coli K-12 ortholog: b3335; Escherichia coli O157:H7 ortholog: z4693; bifunctional; Leader peptidase; N-methyltransferase; Belongs to the peptidase A24 family.	0.950
hofF	hofG	c4098	c4099	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Putative general secretion pathway protein G precursor; Protein transport protein hofG; Escherichia coli K-12 ortholog: b3328.	0.995
hofF	hofH	c4098	c4100	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Putative general secretion pathway protein H precursor; Protein transport protein hofH; Escherichia coli K-12 ortholog: b3329.	0.981
hofF	pshM	c4098	c4105	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Putative general secretion pathway protein M; Transport protein pshM; Escherichia coli K-12 ortholog: b3334.	0.992
hofF	yheE	c4098	c4095	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein C; Escherichia coli K-12 ortholog: b3324.	0.988
hofF	yheF	c4098	c4096	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein D precursor; Escherichia coli K-12 ortholog: b3325.	0.972
hofF	yheG	c4098	c4097	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.999
hofF	yheH	c4098	c4101	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein I precursor; Escherichia coli K-12 ortholog: b3330; Escherichia coli O157:H7 ortholog: z5741.	0.979
hofF	yheI	c4098	c4102	Putative general secretion pathway protein F; Protein transport protein hofF; Escherichia coli K-12 ortholog: b3327.	Probable general secretion pathway protein J precursor; Escherichia coli K-12 ortholog: b3331.	0.981