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ycdP ycdP ycdQ ycdQ ycdR ycdR ycdS ycdS c1170 c1170 c1956 c1956 c3652 c3652
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ycdPHypothetical protein ycdP; Escherichia coli K-12 ortholog: b1021; Escherichia coli O157:H7 ortholog: z1523. (137 aa)
ycdQHypothetical protein ycdQ; Escherichia coli K-12 ortholog: b1022; Escherichia coli O157:H7 ortholog: z1524. (441 aa)
ycdRHypothetical lipoprotein ycdR precursor; Escherichia coli K-12 ortholog: b1023; Escherichia coli O157:H7 ortholog: z1525. (672 aa)
ycdSHypothetical protein ycdS precursor; Escherichia coli K-12 ortholog: b1024; Escherichia coli O157:H7 ortholog: z1526. (807 aa)
c1170Hypothetical protein yfjI; Escherichia coli K-12 ortholog: b2625; Escherichia coli O157:H7 ortholog: z1565. (486 aa)
c1956Putative outer membrane protein yieC precursor; Escherichia coli K-12 ortholog: b3720. (557 aa)
c3652Hypothetical protein yfjI; Escherichia coli K-12 ortholog: b2625. (502 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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