STRINGSTRING
torS torS torT torT torR torR rstA rstA rstB rstB yedV yedV yedW yedW arcB arcB envZ envZ ompR ompR arcA arcA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
torSSensor protein torS; Escherichia coli K-12 ortholog: b0993; Escherichia coli O157:H7 ortholog: z1410. (576 aa)
torTPeriplasmic protein torT precursor; Escherichia coli K-12 ortholog: b0994; Escherichia coli O157:H7 ortholog: z1411. (342 aa)
torRTorCAD operon transcriptional Regulatory protein torR; Escherichia coli K-12 ortholog: b0995; Escherichia coli O157:H7 ortholog: z1412. (230 aa)
rstATranscriptional Regulatory protein rstA; Escherichia coli K-12 ortholog: b1608; Escherichia coli O157:H7 ortholog: z2609. (259 aa)
rstBSensor protein rstB; Escherichia coli K-12 ortholog: b1609; Escherichia coli O157:H7 ortholog: z2610. (433 aa)
yedVPutative sensor-like histidine kinase yedV; Member of a two-component regulatory system. (452 aa)
yedWProbable transcriptional Regulatory protein yedW; Escherichia coli K-12 ortholog: b1969; Escherichia coli O157:H7 ortholog: z3061. (260 aa)
arcBAerobic respiration control sensor protein arcB; Escherichia coli K-12 ortholog: b3210; Escherichia coli O157:H7 ortholog: z4574. (778 aa)
envZOsmolarity sensor protein envZ; Escherichia coli K-12 ortholog: b3404; Escherichia coli O157:H7 ortholog: z4759. (450 aa)
ompRTranscriptional Regulatory protein ompR; Member of the two-component regulatory system EnvZ/OmpR involved in osmoregulation (particularly of genes ompF and ompC) as well as other genes. Plays a central role in both acid and osmotic stress responses. Binds to the promoter of both ompC and ompF; at low osmolarity it activates ompF transcription, while at high osmolarity it represses ompF and activates ompC transcription. (239 aa)
arcAAerobic respiration control protein arcA; Member of the two-component regulatory system ArcB/ArcA. Represses a wide variety of aerobic enzymes under anaerobic conditions. It also may be involved in the osmoregulation of envelope proteins. When activated by ArcB, it negatively regulates the expression of genes of aerobic function. Activates the transcription of the plfB operon by binding to its promoter (By similarity). (238 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.