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yacH yacH ybaY ybaY rna rna yliI yliI recE recE ychP ychP hslJ hslJ ydiY ydiY sbmC sbmC yfaZ yfaZ yhhN yhhN yhjL yhjL yhjM yhjM yhjN yhjN yhjO yhjO yhjQ yhjQ yhjR yhjR yhjS yhjS yhjT yhjT yhjU yhjU mtlR mtlR yibL yibL yjjQ yjjQ bglJ bglJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yacHHypothetical protein yacH; Escherichia coli K-12 ortholog: b0117; Escherichia coli O157:H7 ortholog: z0127. (593 aa)
ybaYHypothetical protein ybaY precursor; Escherichia coli K-12 ortholog: b0453; Escherichia coli O157:H7 ortholog: z0565. (190 aa)
rnaRibonuclease I precursor; Escherichia coli K-12 ortholog: b0611; Escherichia coli O157:H7 ortholog: z0755; Belongs to the RNase T2 family. (274 aa)
yliIHypothetical protein yliI precursor; Escherichia coli K-12 ortholog: b0837; Escherichia coli O157:H7 ortholog: z1063. (371 aa)
recEExodeoxyribonuclease VIII; Escherichia coli K-12 ortholog: b1350. (813 aa)
ychPHypothetical protein ychO; Escherichia coli K-12 ortholog: b1220; Escherichia coli O157:H7 ortholog: z1995. (464 aa)
hslJHeat shock protein hslJ; Escherichia coli K-12 ortholog: b1379; Escherichia coli O157:H7 ortholog: z2330. (144 aa)
ydiYHypothetical protein ydiY precursor; Escherichia coli K-12 ortholog: b1722; Escherichia coli O157:H7 ortholog: z2751. (252 aa)
sbmCDNA gyrase inhibitory protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. (157 aa)
yfaZHypothetical protein yfaZ precursor; Escherichia coli K-12 ortholog: b2250; Escherichia coli O157:H7 ortholog: z3508. (187 aa)
yhhNHypothetical protein yhhN; Escherichia coli K-12 ortholog: b3468; Escherichia coli O157:H7 ortholog: z4842. (208 aa)
yhjLCellulose synthase operon protein C; Escherichia coli K-12 ortholog: b3530; Escherichia coli O157:H7 ortholog: z4944. (1157 aa)
yhjMEndoglucanase precursor; Escherichia coli K-12 ortholog: b3531; Escherichia coli O157:H7 ortholog: z4946; Belongs to the glycosyl hydrolase 8 (cellulase D) family. (370 aa)
yhjNCyclic di-GMP binding protein precursor; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (808 aa)
yhjOCellulose synthase catalytic subunit (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. (888 aa)
yhjQHypothetical protein yhjQ; Escherichia coli K-12 ortholog: b3534; Escherichia coli O157:H7 ortholog: z4949. (250 aa)
yhjRHypothetical protein yhjR; Escherichia coli K-12 ortholog: b3535; Escherichia coli O157:H7 ortholog: z4951. (62 aa)
yhjSHypothetical protein yhjS; Escherichia coli K-12 ortholog: b3536; Escherichia coli O157:H7 ortholog: z4952. (523 aa)
yhjTHypothetical protein yhjT; Escherichia coli K-12 ortholog: b3537; Escherichia coli O157:H7 ortholog: z4953. (63 aa)
yhjUHypothetical protein yhjU; Escherichia coli K-12 ortholog: b3538; Escherichia coli O157:H7 ortholog: z4954. (559 aa)
mtlRMannitol operon repressor; Involved in the repression of the expression of the mannitol mtlADR operon. Does not bind the operator/promoter regulatory region of this operon. Therefore, seems to belong to a new class of transcription factors in bacteria that may regulate gene expression indirectly, perhaps as a part of a larger transcriptional complex. Belongs to the MtlR/FumE family. (195 aa)
yibLHypothetical protein yibL; Escherichia coli K-12 ortholog: b3602; Escherichia coli O157:H7 ortholog: z5026. (120 aa)
yjjQHypothetical protein yjjQ; Escherichia coli K-12 ortholog: b4365; Escherichia coli O157:H7 ortholog: z5966. (241 aa)
bglJTranscriptional activator protein bglJ; Escherichia coli K-12 ortholog: b4366; Escherichia coli O157:H7 ortholog: z5967. (225 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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