STRINGSTRING
araH araH araG araG araF araF mglC mglC mglA mglA mglB mglB yphC yphC yphD yphD yphE yphE yphF yphF c4015 c4015 c4016 c4016 c4017 c4017 rbsD rbsD rbsA rbsA rbsC rbsC rbsB rbsB yjcP yjcP yjcQ yjcQ yjcR yjcR ytcA ytcA yjcS yjcS yjcT yjcT yjcU yjcU yjcV yjcV yjcW yjcW yjcX yjcX rpiR rpiR ytfQ ytfQ ytfR ytfR ytfT ytfT yjfF yjfF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
araHHigh-affinity L-arabinose transport system; Escherichia coli K-12 ortholog: b1899; Escherichia coli O157:H7 ortholog: z2951; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
araGL-arabinose transport ATP-binding protein araG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (519 aa)
araFL-arabinose-binding periplasmic protein precursor; ABP; Escherichia coli K-12 ortholog: b1901; Escherichia coli O157:H7 ortholog: z2954. (346 aa)
mglCGalactoside transport system permease protein mglC; Escherichia coli K-12 ortholog: b2148; Escherichia coli O157:H7 ortholog: z3403; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
mglAGalactoside transport ATP-binding protein mglA; Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system. (506 aa)
mglBD-galactose-binding periplasmic protein precursor; This protein is involved in the active transport of galactose and glucose. It plays a role in the chemotaxis towards the two sugars by interacting with the trg chemoreceptor (By similarity). (332 aa)
yphCHypothetical zinc-type alcohol dehydrogenase-like protein yphC; Escherichia coli K-12 ortholog: b2545; Escherichia coli O157:H7 ortholog: z3817. (364 aa)
yphDHypothetical ABC transporter permease protein yphD; Escherichia coli K-12 ortholog: b2546; Escherichia coli O157:H7 ortholog: z3819; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
yphEHypothetical ABC transporter ATP-binding protein yphE; Escherichia coli K-12 ortholog: b2547; Escherichia coli O157:H7 ortholog: z3821. (503 aa)
yphFABC transporter Periplasmic binding protein yphF precursor; Escherichia coli K-12 ortholog: b2548; Escherichia coli O157:H7 ortholog: z3823. (327 aa)
c4015Ribose transport system permease protein rbsC; Escherichia coli K-12 ortholog: b3750; Escherichia coli O157:H7 ortholog: z5690; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
c4016Ribose transport ATP-binding protein rbsA; Escherichia coli K-12 ortholog: b3749; Escherichia coli O157:H7 ortholog: z5250. (508 aa)
c4017Putative ribose ABC transporter; Ribose-binding protein; Residues 5 to 298 of 298 are 60.67 pct identical to residues 2 to 296 of 296 from GenPept.129 : >emb|CAC49355.1| (AL603645) putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti]. (298 aa)
rbsDHigh affinity ribose transport protein rbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (143 aa)
rbsARibose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (501 aa)
rbsCRibose transport system permease protein rbsC; Part of the ABC transporter complex RbsABC involved in ribose import. Probably responsible for the translocation of the substrate across the membrane. (321 aa)
rbsBD-ribose-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b3751; Escherichia coli O157:H7 ortholog: z5252. (298 aa)
yjcPHypothetical outer-membrane lipoprotein yjcP precursor; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride. (488 aa)
yjcQHypothetical transporter yjcQ; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride. (683 aa)
yjcRHypothetical protein yjcR; Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride. (343 aa)
ytcAHypothetical protein; Residues 17 to 107 of 107 are 95.60 pct identical to residues 1 to 91 of 91 from GenPept.129 : >dbj|BAB38488.1| (AP002568) hypothetical protein [Escherichia coli O157:H7]. (107 aa)
yjcSHypothetical protein yjcS; Escherichia coli K-12 ortholog: b4083; Escherichia coli O157:H7 ortholog: z5683. (665 aa)
yjcTD-allose kinase; Catalyzes the phosphorylation of D-allose to D-allose 6- phosphate. (309 aa)
yjcUD-allulose-6-phosphate 3-epimerase; Escherichia coli K-12 ortholog: b4085. (233 aa)
yjcVD-allose transport system permease protein alsC; Escherichia coli K-12 ortholog: b4086; Escherichia coli O157:H7 ortholog: z5251; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
yjcWD-allose transport ATP-binding protein alsA; Escherichia coli K-12 ortholog: b4087; Escherichia coli O157:H7 ortholog: z3404. (510 aa)
yjcXD-allose-binding periplasmic protein precursor; ALBP; Escherichia coli K-12 ortholog: b4088. (313 aa)
rpiRProtein rpiR; Regulatory protein involved in rpiB gene repression. Also involved in als operon repression (By similarity). (307 aa)
ytfQABC transporter Periplasmic binding protein ytfQ precursor; Escherichia coli K-12 ortholog: b4227; Escherichia coli O157:H7 ortholog: z5838. (318 aa)
ytfRPutative ATP-binding component of a transport system; Escherichia coli K-12 ortholog: b4228; Escherichia coli O157:H7 ortholog: z5839. (500 aa)
ytfTHypothetical ABC transporter permease protein ytfT; Escherichia coli K-12 ortholog: b4230; Escherichia coli O157:H7 ortholog: z5840; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
yjfFHypothetical ABC transporter permease protein yjfF; Escherichia coli K-12 ortholog: b4231; Escherichia coli O157:H7 ortholog: z5841; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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